Co-expression analysis

Gene ID PtpAffx.208671.1.S1_at
Gene name hypothetical protein
Homology with ArabidopsisSimilar to At3g26570: PHT2 (HF=1e-42)
Module size 8 genes
NF 0.27
%ile 48.9

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.6791.10.93PtpAffx.208671.1.S1_atpmrna17204hypothetical protein-1e-42At3g26570PHT2O.I.H.G.S.X.
0.7192.60.93PtpAffx.220081.1.S1_atpmrna36392hypothetical protein-4e-12At1g31920pentatricopeptide (PPR) repeat-containing proteinO.I.H.G.S.X.
0.3357.50.93PtpAffx.26319.2.A1_a_atCV279156hypothetical protein-3e-14At2g32480membrane-associated zinc metalloprotease, putativeO.I.H.G.S.X.
0.2238.30.96PtpAffx.224839.1.S1_atpmrna43719hypothetical protein-3e-9At3g04760pentatricopeptide (PPR) repeat-containing proteinO.I.H.G.S.X.
0.2136.50.93PtpAffx.120497.2.A1_s_atCV277070hypothetical protein-6e-28At5g27390-O.I.H.G.S.X.
0.2034.60.94PtpAffx.61107.1.S1_atCV283393hypothetical protein-1e-22At1g14345oxidoreductaseO.I.H.G.S.X.
0.1932.70.94Ptp.4481.1.S1_a_atDN489068hypothetical protein-4e-1At4g16410unknown proteinO.I.H.G.S.X.
0.1729.10.93PtpAffx.200973.1.S1_atpmrna1901hypothetical protein-2e+0At4g22000unknown proteinO.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
3.995.1GSM362886Clone1979_LPI2_N-_4w_rep2GSE14515Comparative transcriptomics analysis of Populus leaves under nitrogen limitation: clone 1979Link to GEO
3.393.7GSM327661Populus balsamifera_Male_Catkin_midday_3GSE13990Populus balsamifera developmental tissue seriesLink to GEO
2.791.8GSM372045Clone1979_LPI5_N+_8w_rep2GSE14515Comparative transcriptomics analysis of Populus leaves under nitrogen limitation: clone 1979Link to GEO
2.691.3GSM327404Populus balsamifera_1006_young_leaf_midday_1GSE13990Populus balsamifera developmental tissue seriesLink to GEO
2.590.9GSM372044Clone1979_LPI5_N+_8w_rep1GSE14515Comparative transcriptomics analysis of Populus leaves under nitrogen limitation: clone 1979Link to GEO
2.490.4GSM372042Clone1979_LPI5_N-_8w_rep1GSE14515Comparative transcriptomics analysis of Populus leaves under nitrogen limitation: clone 1979Link to GEO
2.188.6GSM362883Clone1979_LPI2_N+_4w_rep1GSE14515Comparative transcriptomics analysis of Populus leaves under nitrogen limitation: clone 1979Link to GEO
2.188.6GSM362887Clone1979_LPI5_N+_4w_rep1GSE14515Comparative transcriptomics analysis of Populus leaves under nitrogen limitation: clone 1979Link to GEO
2.188.6GSM136938Poplar contacted with P. aeruginosa PAO1 in 1 x hrp + 0.25 % sucroseGSE5887Pseudomonas aeruginosa PAO1 virulent genes in the poplar rhizosphereLink to GEO
1.785.5GSM372043Clone1979_LPI5_N-_8w_rep2GSE14515Comparative transcriptomics analysis of Populus leaves under nitrogen limitation: clone 1979Link to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Triticum_aestivum
Vitis_vinifera
Zea_mays



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