Co-expression analysis

Gene ID	PtpAffx.208444.1.S1_at
Gene name	hypothetical protein
Homology with Arabidopsis	Similar to At5g47790: forkhead-associated domain-containing protein / FHA domain-containing protein (HF=3e-1)
Module size	9 genes
NF	0.45
%ile	74.0

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.55	82.2	0.87	PtpAffx.208444.1.S1_at	pmrna16776	hypothetical protein	-	3e-1	At5g47790	forkhead-associated domain-containing protein / FHA domain-containing protein	O.I.	H.G.	S.X.	Please selecteFP Browser (expression)
0.50	78.6	0.87	PtpAffx.88928.1.A1_at	CV245824	hypothetical protein	-	2e+0	At2g44940	AP2 domain-containing transcription factor TINY, putative	O.I.	H.G.	S.X.	Please selecteFP Browser (expression)
0.43	69.7	0.89	PtpAffx.216338.1.S1_at	pmrna31052	hypothetical protein	-	2e+0	At5g05657	-	O.I.	H.G.	S.X.	Please selecteFP Browser (expression)
0.42	68.6	0.87	PtpAffx.222982.1.S1_at	pmrna40736	hypothetical protein	-	4e-42	At1g23460	polygalacturonase	O.I.	H.G.	S.X.	Please selecteFP Browser (expression)
0.42	68.6	0.86	PtpAffx.114218.1.A1_at	CV266727	hypothetical protein	-	8e-11	At1g02475	-	O.I.	H.G.	S.X.	Please selecteFP Browser (expression)
0.42	68.6	0.87	PtpAffx.132024.1.A1_at	DN493469	-	-	3e+0	At4g18450	ethylene-responsive factor, putative	O.I.	H.G.	S.X.	Please selecteFP Browser (expression)
0.40	67.0	0.87	PtpAffx.223429.1.S1_at	pmrna41433	-	-	2e-14	Atcg01250	-	O.I.	H.G.	S.X.	Please selecteFP Browser (expression)
0.38	63.7	0.86	PtpAffx.203615.1.S1_at	pmrna7165	hypothetical protein	-	8e-1	At3g58330	unknown protein	O.I.	H.G.	S.X.	Please selecteFP Browser (expression)
0.33	57.5	0.88	Ptp.7617.1.S1_at	BU816429	-	-	5e+0	At3g45320	unknown protein	O.I.	H.G.	S.X.	Please selecteFP Browser (expression)

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
10.2	99.0	GSM327661	Populus balsamifera_Male_Catkin_midday_3	GSE13990	Populus balsamifera developmental tissue series
3.9	95.1	GSM327656	Populus balsamifera_Female_Catkin_midday_1	GSE13990	Populus balsamifera developmental tissue series
3.7	94.7	GSM327660	Populus balsamifera_Male_Catkin_midday_2	GSE13990	Populus balsamifera developmental tissue series
3.4	94.0	GSM327404	Populus balsamifera_1006_young_leaf_midday_1	GSE13990	Populus balsamifera developmental tissue series
3.2	93.5	GSM327411	Populus balsamifera_1006_differentiating_xylem_midday_1	GSE13990	Populus balsamifera developmental tissue series
3.1	93.2	GSM362887	Clone1979_LPI5_N+_4w_rep1	GSE14515	Comparative transcriptomics analysis of Populus leaves under nitrogen limitation: clone 1979
3.0	92.9	GSM327405	Populus balsamifera_1006_young_leaf_midday_2	GSE13990	Populus balsamifera developmental tissue series
2.7	91.8	GSM327659	Populus balsamifera_Male_Catkin_midday_1	GSE13990	Populus balsamifera developmental tissue series
2.1	88.6	GSM327403	Populus balsamifera_20071015_Etiolated_seedling_6d_3	GSE13990	Populus balsamifera developmental tissue series
1.9	87.2	GSM327409	Populus balsamifera_1006_root_midday_3	GSE13990	Populus balsamifera developmental tissue series

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Hordeum_vulgare

Oryza_sativa

Triticum_aestivum

Vitis_vinifera

Zea_mays

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