Co-expression analysis

Gene ID PtpAffx.208344.1.S1_s_at
Gene name hypothetical protein
Homology with ArabidopsisSimilar to At5g18860: inosine-uridine preferring nucleoside hydrolase family protein (HF=4e-10)
Module size 6 genes
NF 0.55
%ile 86.1

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.3661.60.90PtpAffx.208344.1.S1_s_atpmrna16589hypothetical protein-4e-10At5g18860inosine-uridine preferring nucleoside hydrolase family proteinO.I.H.G.S.X.
0.7794.90.91PtpAffx.200612.1.S1_atpmrna1199hypothetical protein-9e-6At1g79900BAC2O.I.H.G.S.X.
0.5582.20.91PtpAffx.137415.1.S1_atDN498331hypothetical protein-2e-6At5g65380ripening-responsive protein, putativeO.I.H.G.S.X.
0.4774.60.91PtpAffx.209971.1.S1_atpmrna19663hypothetical protein-2e-16At3g15350glycosyltransferase family 14 protein / core-2/I-branching enzyme family proteinO.I.H.G.S.X.
0.4774.60.93Ptp.5423.1.A1_atCV240924hypothetical protein-7e-6At5g65380ripening-responsive protein, putativeO.I.H.G.S.X.
0.4673.70.91PtpAffx.217025.1.S1_atpmrna32130hypothetical protein-2e-6At1g72540protein kinase, putativeO.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
4.195.5GSM327661Populus balsamifera_Male_Catkin_midday_3GSE13990Populus balsamifera developmental tissue seriesLink to GEO
3.894.9GSM327659Populus balsamifera_Male_Catkin_midday_1GSE13990Populus balsamifera developmental tissue seriesLink to GEO
3.694.5GSM327658Populus balsamifera_Female_Catkin_midday_3GSE13990Populus balsamifera developmental tissue seriesLink to GEO
3.694.5GSM327400Populus balsamifera_20071015_Etiolated_seedling_6d_1GSE13990Populus balsamifera developmental tissue seriesLink to GEO
3.293.5GSM372091Clone3200_LPI2_N-_4w_rep1GSE14893Comparative transcriptomics analysis of Populus leaves under nitrogen limitation: clone 3200Link to GEO
2.791.8GSM327656Populus balsamifera_Female_Catkin_midday_1GSE13990Populus balsamifera developmental tissue seriesLink to GEO
2.691.3GSM327402Populus balsamifera_20071015_Etiolated_seedling_6d_2GSE13990Populus balsamifera developmental tissue seriesLink to GEO
2.389.8GSM327657Populus balsamifera_Female_Catkin_midday_2GSE13990Populus balsamifera developmental tissue seriesLink to GEO
2.289.3GSM244437Mmd infected tissue, biological rep2GSE9673Comparative transcriptomic reveals signatures specific to various interactions with Melampsora rust fungiLink to GEO
2.289.3GSM372089Clone3200_LPI2_N+_4w_rep1GSE14893Comparative transcriptomics analysis of Populus leaves under nitrogen limitation: clone 3200Link to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Triticum_aestivum
Vitis_vinifera
Zea_mays



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