Co-expression analysis

Gene ID PtpAffx.208025.1.S1_at
Gene name hypothetical protein
Homology with ArabidopsisSimilar to At1g67030: ZFP6 (ZINC FINGER PROTEIN 6) (HF=4e-10)
Module size 6 genes
NF 0.65
%ile 93.4

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.9199.20.95PtpAffx.208025.1.S1_atpmrna15931hypothetical protein-4e-10At1g67030ZFP6 (ZINC FINGER PROTEIN 6)O.I.H.G.S.X.
0.7794.90.94PtpAffx.162571.1.A1_atCV253632--3e-12At4g14465DNA-binding protein-relatedO.I.H.G.S.X.
0.6791.10.95PtpAffx.47344.1.S1_atCK097216white-brown-complex ABC transporter family /// white-brown-complex ABC transporter family-1e-48At1g31770ABC transporter family proteinO.I.H.G.S.X.
0.5078.60.96PtpAffx.212396.1.S1_atpmrna24286hypothetical protein-7e-10At1g71870MATE efflux family proteinO.I.H.G.S.X.
0.4471.90.95PtpAffx.215111.1.S1_atpmrna29094hypothetical protein-2e-2At4g17870-O.I.H.G.S.X.
0.3559.70.94PtpAffx.109035.1.S1_s_atCA821685hypothetical protein-1e-8At2g33770PHO2 (PHOSPHATE 2)O.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
3.393.7GSM372095Clone3200_LPI5_N-_4w_rep1GSE14893Comparative transcriptomics analysis of Populus leaves under nitrogen limitation: clone 3200Link to GEO
3.293.5GSM372094Clone3200_LPI5_N+_4w_rep2GSE14893Comparative transcriptomics analysis of Populus leaves under nitrogen limitation: clone 3200Link to GEO
2.992.5GSM328567Populus x canescens root hypoxia_rep_09GSE13109Effect of hypoxia on gene expression in Grey poplarLink to GEO
2.691.3GSM328564Populus x canescens root hypoxia_rep_06GSE13109Effect of hypoxia on gene expression in Grey poplarLink to GEO
2.490.4GSM328562Populus x canescens root hypoxia_rep_04GSE13109Effect of hypoxia on gene expression in Grey poplarLink to GEO
2.389.8GSM328561Populus x canescens root control_rep_12GSE13109Effect of hypoxia on gene expression in Grey poplarLink to GEO
2.289.3GSM328560Populus x canescens root control_rep_11GSE13109Effect of hypoxia on gene expression in Grey poplarLink to GEO
2.188.6GSM328281Populus x canescens root control_rep_02GSE13109Effect of hypoxia on gene expression in Grey poplarLink to GEO
2.188.6GSM328558Populus x canescens root control_rep_09GSE13109Effect of hypoxia on gene expression in Grey poplarLink to GEO
2.088.0GSM328565Populus x canescens root hypoxia_rep_07GSE13109Effect of hypoxia on gene expression in Grey poplarLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Triticum_aestivum
Vitis_vinifera
Zea_mays



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