Co-expression analysis

Gene ID PtpAffx.207685.1.S1_at
Gene name hypothetical protein
Homology with ArabidopsisSimilar to At5g53580: aldo/keto reductase family protein (HF=4e-1)
Module size 11 genes
NF 0.20
%ile 37.4

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.6991.50.87PtpAffx.207685.1.S1_atpmrna15255hypothetical protein-4e-1At5g53580aldo/keto reductase family proteinO.I.H.G.S.X.
0.4471.90.92Ptp.7152.1.A1_atDN488191hypothetical protein-4e-2At1g62530unknown proteinO.I.H.G.S.X.
0.3559.70.93PtpAffx.8674.4.S1_atCV233756hypothetical protein-5e-7At2g33510protein bindingO.I.H.G.S.X.
0.3255.20.91PtpAffx.13823.1.S1_a_atCK095337--3e-1At2g12190cytochrome P450, putativeO.I.H.G.S.X.
0.2543.60.93Ptp.2625.1.S1_atCK093627hypothetical protein-7e+0At1g19180JAZ1 (JASMONATE-ZIM-DOMAIN PROTEIN 1)O.I.H.G.S.X.
0.2238.30.91Ptp.488.1.A1_atCK087424hypothetical protein-2e-1At1g28630unknown proteinO.I.H.G.S.X.
0.2034.60.91PtpAffx.40865.1.S1_atDN499476hypothetical protein-3e-3At3g023606-phosphogluconate dehydrogenase family proteinO.I.H.G.S.X.
0.1932.70.93PtpAffx.8674.3.S1_atCK096938hypothetical protein-8e-8At2g33510protein bindingO.I.H.G.S.X.
0.1525.30.92PtpAffx.16749.1.S1_s_atBU810661hypothetical protein-1e-20At3g58510DEAD box RNA helicase, putative (RH11)O.I.H.G.S.X.
0.0812.90.91PtpAffx.80314.1.A1_atDN492817--5e+0At5g43720unknown proteinO.I.H.G.S.X.
0.0711.60.90PtpAffx.223382.1.S1_atpmrna41357hypothetical protein-4e-25At1g65380CLV2 (clavata 2)O.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
4.696.2GSM328062Populus x canescens leaf control_rep_02GSE13109Effect of hypoxia on gene expression in Grey poplarLink to GEO
3.594.3GSM362888Clone1979_LPI5_N+_4w_rep2GSE14515Comparative transcriptomics analysis of Populus leaves under nitrogen limitation: clone 1979Link to GEO
3.193.2GSM327659Populus balsamifera_Male_Catkin_midday_1GSE13990Populus balsamifera developmental tissue seriesLink to GEO
2.892.1GSM372094Clone3200_LPI5_N+_4w_rep2GSE14893Comparative transcriptomics analysis of Populus leaves under nitrogen limitation: clone 3200Link to GEO
2.289.3GSM327661Populus balsamifera_Male_Catkin_midday_3GSE13990Populus balsamifera developmental tissue seriesLink to GEO
1.886.4GSM328105Populus x canescens leaf hypoxia_rep_01GSE13109Effect of hypoxia on gene expression in Grey poplarLink to GEO
1.785.5GSM372042Clone1979_LPI5_N-_8w_rep1GSE14515Comparative transcriptomics analysis of Populus leaves under nitrogen limitation: clone 1979Link to GEO
1.785.5GSM327404Populus balsamifera_1006_young_leaf_midday_1GSE13990Populus balsamifera developmental tissue seriesLink to GEO
1.785.5GSM328066Populus x canescens leaf control_rep_04GSE13109Effect of hypoxia on gene expression in Grey poplarLink to GEO
1.684.5GSM327660Populus balsamifera_Male_Catkin_midday_2GSE13990Populus balsamifera developmental tissue seriesLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Triticum_aestivum
Vitis_vinifera
Zea_mays



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