Co-expression analysis

Gene ID PtpAffx.207593.1.S1_x_at
Gene name hypothetical protein
Homology with ArabidopsisSimilar to At4g13850: GR-RBP2 (GLYCINE-RICH RNA-BINDING PROTEIN 2) (HF=2e-2)
Module size 14 genes
NF 0.66
%ile 94.1

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.8797.50.92PtpAffx.207593.1.S1_x_atpmrna15069hypothetical protein-2e-2At4g13850GR-RBP2 (GLYCINE-RICH RNA-BINDING PROTEIN 2)O.I.H.G.S.X.
0.7694.30.95PtpAffx.215318.1.S1_s_atpmrna29438hypothetical protein-1e+0At5g61660glycine-rich proteinO.I.H.G.S.X.
0.7192.60.96PtpAffx.90645.2.S1_atCX657409--1e+0At5g04750F1F0-ATPase inhibitor protein, putativeO.I.H.G.S.X.
0.6991.50.96PtpAffx.223705.1.S1_atpmrna41841multidrug/pheromone exporter, MDR family, ABC transporter family /// multidrug/pheromone exporter, MDR family, ABC transporter family-6e-45At1g02520PGP11 (P-GLYCOPROTEIN 11)O.I.H.G.S.X.
0.6991.50.96PtpAffx.223705.1.S1_x_atpmrna41841multidrug/pheromone exporter, MDR family, ABC transporter family /// multidrug/pheromone exporter, MDR family, ABC transporter family-6e-45At1g02520PGP11 (P-GLYCOPROTEIN 11)O.I.H.G.S.X.
0.6791.10.95PtpAffx.141628.1.S1_atBU861542multidrug/pheromone exporter, MDR family, ABC transporter family-1e-7At3g62150PGP21 (P-GLYCOPROTEIN 21)O.I.H.G.S.X.
0.6791.10.95PtpAffx.156807.1.S1_atCX168731hypothetical protein-1e+0At3g12955auxin-responsive protein-relatedO.I.H.G.S.X.
0.6488.40.95PtpAffx.216568.1.S1_s_atpmrna31422hypothetical protein-5e-5At2g36800DOGT1 (DON-GLUCOSYLTRANSFERASE 1)O.I.H.G.S.X.
0.5884.20.97Ptp.4749.1.S1_atBI128337hypothetical protein-5e-10At3g04520THA2 (Threonine Aldolase 2)O.I.H.G.S.X.
0.5784.20.97PtpAffx.212948.1.S1_atpmrna25339hypothetical protein-1e-1At2g15020unknown proteinO.I.H.G.S.X.
0.5683.90.90PtpAffx.207591.1.S1_x_atpmrna15065hypothetical protein-6e-2At4g13850GR-RBP2 (GLYCINE-RICH RNA-BINDING PROTEIN 2)O.I.H.G.S.X.
0.5582.20.96Ptp.1298.1.S1_atCK092541--4e-1At1g76940RNA recognition motif (RRM)-containing proteinO.I.H.G.S.X.
0.5480.80.90PtpAffx.207593.1.S1_atpmrna15069hypothetical protein-2e-2At4g13850GR-RBP2 (GLYCINE-RICH RNA-BINDING PROTEIN 2)O.I.H.G.S.X.
0.4774.60.96PtpAffx.149972.1.S1_atDN498008--9e-1At2g45740PEX11DO.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
6.597.8GSM328564Populus x canescens root hypoxia_rep_06GSE13109Effect of hypoxia on gene expression in Grey poplarLink to GEO
4.996.5GSM327660Populus balsamifera_Male_Catkin_midday_2GSE13990Populus balsamifera developmental tissue seriesLink to GEO
4.495.9GSM328565Populus x canescens root hypoxia_rep_07GSE13109Effect of hypoxia on gene expression in Grey poplarLink to GEO
3.894.9GSM327659Populus balsamifera_Male_Catkin_midday_1GSE13990Populus balsamifera developmental tissue seriesLink to GEO
3.694.5GSM328567Populus x canescens root hypoxia_rep_09GSE13109Effect of hypoxia on gene expression in Grey poplarLink to GEO
3.393.7GSM244437Mmd infected tissue, biological rep2GSE9673Comparative transcriptomic reveals signatures specific to various interactions with Melampsora rust fungiLink to GEO
2.691.3GSM327657Populus balsamifera_Female_Catkin_midday_2GSE13990Populus balsamifera developmental tissue seriesLink to GEO
2.490.4GSM327658Populus balsamifera_Female_Catkin_midday_3GSE13990Populus balsamifera developmental tissue seriesLink to GEO
2.490.4GSM244432non infected tissue, biological rep3GSE9673Comparative transcriptomic reveals signatures specific to various interactions with Melampsora rust fungiLink to GEO
2.289.3GSM328562Populus x canescens root hypoxia_rep_04GSE13109Effect of hypoxia on gene expression in Grey poplarLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Triticum_aestivum
Vitis_vinifera
Zea_mays



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