Co-expression analysis

Gene ID PtpAffx.207593.1.S1_at
Gene name hypothetical protein
Homology with ArabidopsisSimilar to At4g13850: GR-RBP2 (GLYCINE-RICH RNA-BINDING PROTEIN 2) (HF=2e-2)
Module size 6 genes
NF 0.46
%ile 75.5

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.6791.10.97PtpAffx.207593.1.S1_atpmrna15069hypothetical protein-2e-2At4g13850GR-RBP2 (GLYCINE-RICH RNA-BINDING PROTEIN 2)O.I.H.G.S.X.
0.8397.00.94PtpAffx.207593.1.S1_x_atpmrna15069hypothetical protein-2e-2At4g13850GR-RBP2 (GLYCINE-RICH RNA-BINDING PROTEIN 2)O.I.H.G.S.X.
0.8397.00.94PtpAffx.19128.1.S1_atAJ779721hypothetical protein-3e+0At5g48420unknown proteinO.I.H.G.S.X.
0.8096.00.92PtpAffx.207591.1.S1_x_atpmrna15065hypothetical protein-6e-2At4g13850GR-RBP2 (GLYCINE-RICH RNA-BINDING PROTEIN 2)O.I.H.G.S.X.
0.2136.50.96PtpAffx.215318.1.S1_s_atpmrna29438hypothetical protein-1e+0At5g61660glycine-rich proteinO.I.H.G.S.X.
0.1525.30.94PtpAffx.156807.1.S1_atCX168731hypothetical protein-1e+0At3g12955auxin-responsive protein-relatedO.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
9.998.9GSM328564Populus x canescens root hypoxia_rep_06GSE13109Effect of hypoxia on gene expression in Grey poplarLink to GEO
5.597.1GSM328565Populus x canescens root hypoxia_rep_07GSE13109Effect of hypoxia on gene expression in Grey poplarLink to GEO
4.195.5GSM327660Populus balsamifera_Male_Catkin_midday_2GSE13990Populus balsamifera developmental tissue seriesLink to GEO
3.494.0GSM244437Mmd infected tissue, biological rep2GSE9673Comparative transcriptomic reveals signatures specific to various interactions with Melampsora rust fungiLink to GEO
3.393.7GSM328567Populus x canescens root hypoxia_rep_09GSE13109Effect of hypoxia on gene expression in Grey poplarLink to GEO
2.188.6GSM327412Populus balsamifera_1006_differentiating_xylem_midday_2GSE13990Populus balsamifera developmental tissue seriesLink to GEO
1.987.2GSM327658Populus balsamifera_Female_Catkin_midday_3GSE13990Populus balsamifera developmental tissue seriesLink to GEO
1.785.5GSM327659Populus balsamifera_Male_Catkin_midday_1GSE13990Populus balsamifera developmental tissue seriesLink to GEO
1.583.5GSM328077Populus x canescens leaf control_rep_06GSE13109Effect of hypoxia on gene expression in Grey poplarLink to GEO
1.583.5GSM327404Populus balsamifera_1006_young_leaf_midday_1GSE13990Populus balsamifera developmental tissue seriesLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Triticum_aestivum
Vitis_vinifera
Zea_mays



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