Co-expression analysis

Gene ID PtpAffx.207458.1.S1_at
Gene name hypothetical protein
Homology with ArabidopsisSimilar to At3g20190: leucine-rich repeat transmembrane protein kinase, putative (HF=4e-9)
Module size 6 genes
NF 0.61
%ile 91.3

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.9199.21.00PtpAffx.207458.1.S1_atpmrna14805hypothetical protein-4e-9At3g20190leucine-rich repeat transmembrane protein kinase, putativeO.I.H.G.S.X.
0.6086.01.00PtpAffx.219804.1.S1_atpmrna35913hypothetical protein-6e-5At1g03050epsin N-terminal homology (ENTH) domain-containing protein / clathrin assembly protein-relatedO.I.H.G.S.X.
0.5380.51.00PtpAffx.203378.1.S1_atpmrna6722hypothetical protein-4e+0At4g25200ATHSP23.6-MITO (MITOCHONDRION-LOCALIZED SMALL HEAT SHOCK PROTEIN 23.6)O.I.H.G.S.X.
0.5078.61.00PtpAffx.223114.1.S1_atpmrna40948hypothetical protein-1e-1At4g17920zinc finger (C3HC4-type RING finger) family proteinO.I.H.G.S.X.
0.5078.61.00Ptp.3578.1.S1_atDN492970--3e-5At3g04690protein kinase family proteinO.I.H.G.S.X.
0.4067.01.00PtpAffx.211002.1.S1_atpmrna21616hypothetical protein-4e-18At3g04620nucleic acid bindingO.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
12.499.3GSM327661Populus balsamifera_Male_Catkin_midday_3GSE13990Populus balsamifera developmental tissue seriesLink to GEO
11.099.1GSM327659Populus balsamifera_Male_Catkin_midday_1GSE13990Populus balsamifera developmental tissue seriesLink to GEO
10.299.0GSM327660Populus balsamifera_Male_Catkin_midday_2GSE13990Populus balsamifera developmental tissue seriesLink to GEO
6.797.9GSM327657Populus balsamifera_Female_Catkin_midday_2GSE13990Populus balsamifera developmental tissue seriesLink to GEO
6.597.8GSM327658Populus balsamifera_Female_Catkin_midday_3GSE13990Populus balsamifera developmental tissue seriesLink to GEO
4.596.1GSM327656Populus balsamifera_Female_Catkin_midday_1GSE13990Populus balsamifera developmental tissue seriesLink to GEO
2.088.0GSM372095Clone3200_LPI5_N-_4w_rep1GSE14893Comparative transcriptomics analysis of Populus leaves under nitrogen limitation: clone 3200Link to GEO
1.684.5GSM372090Clone3200_LPI2_N+_4w_rep2GSE14893Comparative transcriptomics analysis of Populus leaves under nitrogen limitation: clone 3200Link to GEO
1.583.5GSM327404Populus balsamifera_1006_young_leaf_midday_1GSE13990Populus balsamifera developmental tissue seriesLink to GEO
1.381.0GSM372091Clone3200_LPI2_N-_4w_rep1GSE14893Comparative transcriptomics analysis of Populus leaves under nitrogen limitation: clone 3200Link to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Triticum_aestivum
Vitis_vinifera
Zea_mays



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