Co-expression analysis

Gene ID PtpAffx.207433.1.S1_at
Gene name 1-aminocyclopropane-1-carboxylate
Homology with ArabidopsisSimilar to At3g49700: ACS9 (1-AMINOCYCLOPROPANE-1-CARBOXYLATE SYNTHASE 9) (HF=1e-30)
Module size 12 genes
NF 0.12
%ile 23.4

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.9299.30.84PtpAffx.207433.1.S1_atpmrna147561-aminocyclopropane-1-carboxylate-1e-30At3g49700ACS9 (1-AMINOCYCLOPROPANE-1-CARBOXYLATE SYNTHASE 9)O.I.H.G.S.X.
0.1830.80.94PtpAffx.126445.1.S1_s_atCX182478hypothetical protein-2e-6At1g47290AT3BETAHSD/D1 (3BETA-HYDROXYSTEROID-DEHYDROGENASE/DECARBOXYLASE ISOFORM 1)O.I.H.G.S.X.
0.1729.10.95PtpAffx.15840.1.S1_s_atCV245081hypothetical protein-6e-73At3g023606-phosphogluconate dehydrogenase family proteinO.I.H.G.S.X.
0.1729.10.94PtpAffx.209429.1.S1_atpmrna18671hypothetical protein-1e-11At3g54880unknown proteinO.I.H.G.S.X.
0.1525.30.92Ptp.8117.1.S1_s_atCX654928hypothetical protein-3e-5At3g03860ATAPRL5 (APR-like 5)O.I.H.G.S.X.
0.1423.50.95PtpAffx.19537.2.S1_s_atCV225503hypothetical protein-4e-104At3g61790seven in absentia (SINA) family proteinO.I.H.G.S.X.
0.1118.10.92PtpAffx.157550.1.S1_atBU828904hypothetical protein-5e-55At4g21160ZACO.I.H.G.S.X.
0.1016.30.94PtpAffx.40192.1.A1_s_atCV264380hypothetical protein-2e+0At3g17020universal stress protein (USP) family proteinO.I.H.G.S.X.
0.1016.30.94PtpAffx.145411.1.S1_atBU816047hypothetical protein-3e-1At1g30500NF-YA7 (NUCLEAR FACTOR Y, SUBUNIT A7)O.I.H.G.S.X.
0.0711.60.89Ptp.672.1.A1_atCK087319hypothetical protein-3e-3At4g05020NDB2 (NAD(P)H dehydrogenase B2)O.I.H.G.S.X.
0.069.80.94Ptp.3950.1.S1_atCV246811hypothetical protein-3e-8At5g57815cytochrome c oxidase subunit 6b, putativeO.I.H.G.S.X.
0.023.60.87PtpAffx.86747.1.A1_atDN492035hypothetical protein-2e-36At4g31050lipoyltransferase (LIP2p)O.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
5.096.6GSM362888Clone1979_LPI5_N+_4w_rep2GSE14515Comparative transcriptomics analysis of Populus leaves under nitrogen limitation: clone 1979Link to GEO
3.193.2GSM327658Populus balsamifera_Female_Catkin_midday_3GSE13990Populus balsamifera developmental tissue seriesLink to GEO
2.791.8GSM327660Populus balsamifera_Male_Catkin_midday_2GSE13990Populus balsamifera developmental tissue seriesLink to GEO
2.691.3GSM327659Populus balsamifera_Male_Catkin_midday_1GSE13990Populus balsamifera developmental tissue seriesLink to GEO
2.590.9GSM327657Populus balsamifera_Female_Catkin_midday_2GSE13990Populus balsamifera developmental tissue seriesLink to GEO
1.987.2GSM372095Clone3200_LPI5_N-_4w_rep1GSE14893Comparative transcriptomics analysis of Populus leaves under nitrogen limitation: clone 3200Link to GEO
1.886.4GSM327656Populus balsamifera_Female_Catkin_midday_1GSE13990Populus balsamifera developmental tissue seriesLink to GEO
1.785.5GSM362887Clone1979_LPI5_N+_4w_rep1GSE14515Comparative transcriptomics analysis of Populus leaves under nitrogen limitation: clone 1979Link to GEO
1.785.5GSM327661Populus balsamifera_Male_Catkin_midday_3GSE13990Populus balsamifera developmental tissue seriesLink to GEO
1.684.5GSM327413Populus balsamifera_1006_differentiating_xylem_midday_3GSE13990Populus balsamifera developmental tissue seriesLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Triticum_aestivum
Vitis_vinifera
Zea_mays



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