Co-expression analysis

Gene ID PtpAffx.207158.1.S1_at
Gene name hypothetical protein
Homology with ArabidopsisSimilar to At1g22740: RABG3B (HF=2e-33)
Module size 9 genes
NF 0.04
%ile 8.3

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.5380.50.72PtpAffx.207158.1.S1_atpmrna14205hypothetical protein-2e-33At1g22740RABG3BO.I.H.G.S.X.
0.2034.60.71PtpAffx.210740.1.S1_atpmrna21070hypothetical protein-7e-1At4g05060vesicle-associated membrane family protein / VAMP family proteinO.I.H.G.S.X.
0.1626.90.71PtpAffx.225462.1.S1_atpmrna44824hypothetical protein-2e+0At5g47420-O.I.H.G.S.X.
0.0914.60.73PtpAffx.60907.1.S1_atAY496448.1--1e-112At2g01830WOL (WOODEN LEG)O.I.H.G.S.X.
0.0711.60.72PtpAffx.220765.1.S1_atpmrna37189cyclic nucleotide-gated channel-4e-12At4g30360ATCNGC17O.I.H.G.S.X.
0.046.90.73Ptp.5699.2.S1_atCV276109hypothetical protein-2e-11At3g5575060S ribosomal protein L35a (RPL35aD)O.I.H.G.S.X.
0.012.20.72PtpAffx.7025.2.S1_atCK095019--1e+0At1g29480unknown proteinO.I.H.G.S.X.
0.012.20.73PtpAffx.218048.1.S1_atpmrna33565hypothetical protein-2e+0At5g28450chlorophyll A-B binding protein, chloroplast, putative / LHCI type II CAB, putativeO.I.H.G.S.X.
0.012.20.70PtpAffx.216846.1.S1_atpmrna31886hypothetical protein-6e-1At1g29290unknown proteinO.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
7.798.3GSM327661Populus balsamifera_Male_Catkin_midday_3GSE13990Populus balsamifera developmental tissue seriesLink to GEO
3.594.3GSM327660Populus balsamifera_Male_Catkin_midday_2GSE13990Populus balsamifera developmental tissue seriesLink to GEO
2.992.5GSM327657Populus balsamifera_Female_Catkin_midday_2GSE13990Populus balsamifera developmental tissue seriesLink to GEO
2.490.4GSM334224Populus balsamifera_1006_mature_leaf_midday_1GSE13990Populus balsamifera developmental tissue seriesLink to GEO
2.289.3GSM327659Populus balsamifera_Male_Catkin_midday_1GSE13990Populus balsamifera developmental tissue seriesLink to GEO
2.289.3GSM334225Populus balsamifera_1006_mature_leaf_midday_2GSE13990Populus balsamifera developmental tissue seriesLink to GEO
2.088.0GSM362890Clone1979_LPI5_N-_4w_rep2GSE14515Comparative transcriptomics analysis of Populus leaves under nitrogen limitation: clone 1979Link to GEO
1.987.2GSM362887Clone1979_LPI5_N+_4w_rep1GSE14515Comparative transcriptomics analysis of Populus leaves under nitrogen limitation: clone 1979Link to GEO
1.987.2GSM327407Populus balsamifera_1006_root_midday_1GSE13990Populus balsamifera developmental tissue seriesLink to GEO
1.987.2GSM362885Clone1979_LPI2_N-_4w_rep1GSE14515Comparative transcriptomics analysis of Populus leaves under nitrogen limitation: clone 1979Link to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Triticum_aestivum
Vitis_vinifera
Zea_mays



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