Co-expression analysis

Gene ID	PtpAffx.206842.1.S1_at
Gene name	hypothetical protein
Homology with Arabidopsis	Similar to At4g31850: PGR3 (PROTON GRADIENT REGULATION 3) (HF=2e-28)
Module size	6 genes
NF	0.62
%ile	91.5

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.60	86.0	0.97	PtpAffx.206842.1.S1_at	pmrna13584	hypothetical protein	-	2e-28	At4g31850	PGR3 (PROTON GRADIENT REGULATION 3)	O.I.	H.G.	S.X.	Please selecteFP Browser (expression)
0.80	96.0	0.96	PtpAffx.212549.1.S1_at	pmrna24586	hypothetical protein	-	2e-15	At5g53580	aldo/keto reductase family protein	O.I.	H.G.	S.X.	Please selecteFP Browser (expression)
0.67	91.1	0.97	PtpAffx.52156.2.A1_a_at	CV270967	-	-	6e-8	At5g03900	-	O.I.	H.G.	S.X.	Please selecteFP Browser (expression)
0.50	78.6	0.97	PtpAffx.4470.7.S1_s_at	CF233997	hypothetical protein	-	5e-103	At3g27925	DEGP1 (DegP protease 1)	O.I.	H.G.	S.X.	Please selecteFP Browser (expression)
0.40	67.0	0.97	Ptp.6017.1.S1_a_at	CV235586	hypothetical protein	-	1e-25	At3g15840	PIFI (post-illumination chlorophyll fluorescence increase)	O.I.	H.G.	S.X.	Please selecteFP Browser (expression)
0.40	67.0	0.97	PtpAffx.201153.1.S1_at	pmrna2264	hypothetical protein	-	0	At5g08650	GTP-binding protein LepA, putative	O.I.	H.G.	S.X.	Please selecteFP Browser (expression)

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
5.4	97.0	GSM327660	Populus balsamifera_Male_Catkin_midday_2	GSE13990	Populus balsamifera developmental tissue series
4.6	96.2	GSM327404	Populus balsamifera_1006_young_leaf_midday_1	GSE13990	Populus balsamifera developmental tissue series
3.3	93.7	GSM327657	Populus balsamifera_Female_Catkin_midday_2	GSE13990	Populus balsamifera developmental tissue series
3.0	92.9	GSM327656	Populus balsamifera_Female_Catkin_midday_1	GSE13990	Populus balsamifera developmental tissue series
2.6	91.3	GSM327658	Populus balsamifera_Female_Catkin_midday_3	GSE13990	Populus balsamifera developmental tissue series
2.5	90.9	GSM327659	Populus balsamifera_Male_Catkin_midday_1	GSE13990	Populus balsamifera developmental tissue series
2.2	89.3	GSM362889	Clone1979_LPI5_N-_4w_rep1	GSE14515	Comparative transcriptomics analysis of Populus leaves under nitrogen limitation: clone 1979
2.2	89.3	GSM362886	Clone1979_LPI2_N-_4w_rep2	GSE14515	Comparative transcriptomics analysis of Populus leaves under nitrogen limitation: clone 1979
1.8	86.4	GSM362888	Clone1979_LPI5_N+_4w_rep2	GSE14515	Comparative transcriptomics analysis of Populus leaves under nitrogen limitation: clone 1979
1.8	86.4	GSM362890	Clone1979_LPI5_N-_4w_rep2	GSE14515	Comparative transcriptomics analysis of Populus leaves under nitrogen limitation: clone 1979

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Hordeum_vulgare

Oryza_sativa

Triticum_aestivum

Vitis_vinifera

Zea_mays

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