Co-expression analysis

Gene ID PtpAffx.206496.1.S1_at
Gene name hypothetical protein
Homology with ArabidopsisSimilar to At4g02050: sugar transporter, putative (HF=5e-33)
Module size 10 genes
NF 0.44
%ile 74.0

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.6791.10.93PtpAffx.206496.1.S1_atpmrna12888hypothetical protein-5e-33At4g02050sugar transporter, putativeO.I.H.G.S.X.
0.6488.40.93PtpAffx.18236.1.S1_atCV272788hypothetical protein-1e-10At1g09645unknown proteinO.I.H.G.S.X.
0.5784.20.94PtpAffx.223426.1.S1_atpmrna41429mitochondrial phosphate carrier protein-2e-74At5g14040mitochondrial phosphate transporterO.I.H.G.S.X.
0.5582.20.94PtpAffx.33074.1.S1_atCK091989hypothetical protein-6e-65At5g42000ORMDL family proteinO.I.H.G.S.X.
0.5078.60.95PtpAffx.3546.1.A1_atCV241865hypothetical protein-3e-33At5g10730binding / catalytic/ coenzyme bindingO.I.H.G.S.X.
0.4369.70.95PtpAffx.150892.1.S1_atAJ776439hypothetical protein-3e-79At4g00720ATSK32 (SHAGGY-LIKE PROTEIN KINASE 32)O.I.H.G.S.X.
0.4369.70.96PtpAffx.17728.1.S1_s_atCV275037hypothetical protein-4e-20At1g74320choline kinase, putativeO.I.H.G.S.X.
0.3863.70.95Ptp.2292.1.A1_s_atCV232695hypothetical protein-4e-125At4g35950ARAC6 (ARABIDOPSIS RAC-LIKE 6)O.I.H.G.S.X.
0.2238.30.95PtpAffx.207061.1.S1_s_atpmrna13997hypothetical protein-3e-109At5g64030dehydration-responsive protein-relatedO.I.H.G.S.X.
0.1932.70.96PtpAffx.14532.1.A1_atCK090232hypothetical protein-3e-2At5g64020unknown proteinO.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
3.293.5GSM327658Populus balsamifera_Female_Catkin_midday_3GSE13990Populus balsamifera developmental tissue seriesLink to GEO
2.992.5GSM327660Populus balsamifera_Male_Catkin_midday_2GSE13990Populus balsamifera developmental tissue seriesLink to GEO
2.992.5GSM362886Clone1979_LPI2_N-_4w_rep2GSE14515Comparative transcriptomics analysis of Populus leaves under nitrogen limitation: clone 1979Link to GEO
2.791.8GSM327659Populus balsamifera_Male_Catkin_midday_1GSE13990Populus balsamifera developmental tissue seriesLink to GEO
2.791.8GSM327657Populus balsamifera_Female_Catkin_midday_2GSE13990Populus balsamifera developmental tissue seriesLink to GEO
2.791.8GSM327656Populus balsamifera_Female_Catkin_midday_1GSE13990Populus balsamifera developmental tissue seriesLink to GEO
2.590.9GSM372097Clone3200_LPI5_N-_8w_rep1GSE14893Comparative transcriptomics analysis of Populus leaves under nitrogen limitation: clone 3200Link to GEO
2.289.3GSM327661Populus balsamifera_Male_Catkin_midday_3GSE13990Populus balsamifera developmental tissue seriesLink to GEO
1.886.4GSM328077Populus x canescens leaf control_rep_06GSE13109Effect of hypoxia on gene expression in Grey poplarLink to GEO
1.886.4GSM372096Clone3200_LPI5_N-_4w_rep2GSE14893Comparative transcriptomics analysis of Populus leaves under nitrogen limitation: clone 3200Link to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Triticum_aestivum
Vitis_vinifera
Zea_mays



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