Co-expression analysis

Gene ID PtpAffx.206163.1.S1_at
Gene name hypothetical protein
Homology with ArabidopsisSimilar to At2g41480: electron carrier/ heme binding / peroxidase (HF=5e-13)
Module size 11 genes
NF 0.13
%ile 25.7

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.5984.90.83PtpAffx.206163.1.S1_atpmrna12232hypothetical protein-5e-13At2g41480electron carrier/ heme binding / peroxidaseO.I.H.G.S.X.
0.2950.50.84PtpAffx.219632.1.S1_atpmrna35594hypothetical protein-2e+0At4g24070carbon-carbon lyaseO.I.H.G.S.X.
0.2441.80.84PtpAffx.140465.1.A1_atCV257226--1e+1At4g07825unknown proteinO.I.H.G.S.X.
0.2136.50.88PtpAffx.200917.1.S1_atpmrna1808hypothetical protein-9e-35At2g30130ASL5O.I.H.G.S.X.
0.1830.80.87PtpAffx.77335.1.S1_atDN493413hypothetical protein-4e-1At2g29450ATGSTU5 (ARABIDOPSIS THALIANA GLUTATHIONE S-TRANSFERASE TAU 5)O.I.H.G.S.X.
0.1423.50.84PtpAffx.18039.1.A1_atCV263969--1e-3At2g47060serine/threonine protein kinase, putativeO.I.H.G.S.X.
0.1423.50.88PtpAffx.36788.2.S1_atCK106901hypothetical protein-1e-6At4g36450ATMPK14 (Mitogen-activated protein kinase 14)O.I.H.G.S.X.
0.1118.10.88PtpAffx.77318.2.S1_atCX658035hypothetical protein-5e-4At3g12500ATHCHIB (ARABIDOPSIS THALIANA BASIC CHITINASE)O.I.H.G.S.X.
0.0914.60.88PtpAffx.211137.1.S1_atpmrna21879hypothetical protein-5e-8At3g03540NPC5 (NON-SPECIFIC PHOSPHOLIPASE C5)O.I.H.G.S.X.
0.0812.90.88Ptp.3664.1.S1_atBU836355hypothetical protein-2e-37At2g17530protein kinase family proteinO.I.H.G.S.X.
0.069.80.83PtpAffx.131798.1.S1_atDN501875hypothetical protein-5e+0At5g23920unknown proteinO.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
3.293.5GSM327661Populus balsamifera_Male_Catkin_midday_3GSE13990Populus balsamifera developmental tissue seriesLink to GEO
3.193.2GSM327660Populus balsamifera_Male_Catkin_midday_2GSE13990Populus balsamifera developmental tissue seriesLink to GEO
3.092.9GSM327659Populus balsamifera_Male_Catkin_midday_1GSE13990Populus balsamifera developmental tissue seriesLink to GEO
2.892.1GSM362890Clone1979_LPI5_N-_4w_rep2GSE14515Comparative transcriptomics analysis of Populus leaves under nitrogen limitation: clone 1979Link to GEO
2.590.9GSM362883Clone1979_LPI2_N+_4w_rep1GSE14515Comparative transcriptomics analysis of Populus leaves under nitrogen limitation: clone 1979Link to GEO
2.389.8GSM372091Clone3200_LPI2_N-_4w_rep1GSE14893Comparative transcriptomics analysis of Populus leaves under nitrogen limitation: clone 3200Link to GEO
2.389.8GSM327656Populus balsamifera_Female_Catkin_midday_1GSE13990Populus balsamifera developmental tissue seriesLink to GEO
2.188.6GSM362888Clone1979_LPI5_N+_4w_rep2GSE14515Comparative transcriptomics analysis of Populus leaves under nitrogen limitation: clone 1979Link to GEO
2.188.6GSM362887Clone1979_LPI5_N+_4w_rep1GSE14515Comparative transcriptomics analysis of Populus leaves under nitrogen limitation: clone 1979Link to GEO
1.987.2GSM372092Clone3200_LPI2_N-_4w_rep2GSE14893Comparative transcriptomics analysis of Populus leaves under nitrogen limitation: clone 3200Link to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Triticum_aestivum
Vitis_vinifera
Zea_mays



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