Co-expression analysis

Gene ID	PtpAffx.206099.1.S1_at
Gene name	hypothetical protein
Homology with Arabidopsis	Similar to At3g57240: BG3 (BETA-1,3-GLUCANASE 3) (HF=8e-3)
Module size	6 genes
NF	0.67
%ile	94.8

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.67	91.1	0.92	PtpAffx.206099.1.S1_at	pmrna12085	hypothetical protein	-	8e-3	At3g57240	BG3 (BETA-1,3-GLUCANASE 3)	O.I.	H.G.	S.X.	Please selecteFP Browser (expression)
0.91	99.2	0.93	PtpAffx.205154.1.S1_at	pmrna10202	hypothetical protein	-	2e-1	At2g01870	unknown protein	O.I.	H.G.	S.X.	Please selecteFP Browser (expression)
0.77	94.9	0.92	PtpAffx.203765.1.S1_at	pmrna7437	hypothetical protein	-	8e-1	At4g28680	tyrosine decarboxylase, putative	O.I.	H.G.	S.X.	Please selecteFP Browser (expression)
0.60	86.0	0.93	PtpAffx.225099.1.S1_at	pmrna44197	hypothetical protein	-	3e-109	At4g30020	subtilase family protein	O.I.	H.G.	S.X.	Please selecteFP Browser (expression)
0.57	84.2	0.93	PtpAffx.204886.1.S1_at	pmrna9652	white-brown-complex ABC transporter family	-	5e-46	At1g51500	CER5 (ECERIFERUM 5)	O.I.	H.G.	S.X.	Please selecteFP Browser (expression)
0.27	47.1	0.93	PtpAffx.38430.1.S1_at	CV271261	hypothetical protein	-	5e+0	At4g22890	PGR5-LIKE A	O.I.	H.G.	S.X.	Please selecteFP Browser (expression)

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
7.3	98.2	GSM327404	Populus balsamifera_1006_young_leaf_midday_1	GSE13990	Populus balsamifera developmental tissue series
6.5	97.8	GSM327405	Populus balsamifera_1006_young_leaf_midday_2	GSE13990	Populus balsamifera developmental tissue series
6.4	97.7	GSM327661	Populus balsamifera_Male_Catkin_midday_3	GSE13990	Populus balsamifera developmental tissue series
3.7	94.7	GSM372092	Clone3200_LPI2_N-_4w_rep2	GSE14893	Comparative transcriptomics analysis of Populus leaves under nitrogen limitation: clone 3200
3.6	94.5	GSM327406	Populus balsamifera_1006_young_leaf_midday_3	GSE13990	Populus balsamifera developmental tissue series
3.1	93.2	GSM136936	Poplar in 1 x hrp + 0.25 % sucrose no bacteria	GSE5887	Pseudomonas aeruginosa PAO1 virulent genes in the poplar rhizosphere
2.6	91.3	GSM372091	Clone3200_LPI2_N-_4w_rep1	GSE14893	Comparative transcriptomics analysis of Populus leaves under nitrogen limitation: clone 3200
2.5	90.9	GSM327660	Populus balsamifera_Male_Catkin_midday_2	GSE13990	Populus balsamifera developmental tissue series
2.2	89.3	GSM372089	Clone3200_LPI2_N+_4w_rep1	GSE14893	Comparative transcriptomics analysis of Populus leaves under nitrogen limitation: clone 3200
2.2	89.3	GSM362889	Clone1979_LPI5_N-_4w_rep1	GSE14515	Comparative transcriptomics analysis of Populus leaves under nitrogen limitation: clone 1979

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Hordeum_vulgare

Oryza_sativa

Triticum_aestivum

Vitis_vinifera

Zea_mays

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