Co-expression analysis

Gene ID	PtpAffx.205814.1.S1_at
Gene name	hypothetical protein
Homology with Arabidopsis	Similar to At5g23140: NCLPP7 (NUCLEAR-ENCODED CLP PROTEASE P7) (HF=2e-1)
Module size	6 genes
NF	0.06
%ile	13.8

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.60	86.0	0.85	PtpAffx.205814.1.S1_at	pmrna11500	hypothetical protein	-	2e-1	At5g23140	NCLPP7 (NUCLEAR-ENCODED CLP PROTEASE P7)	O.I.	H.G.	S.X.	Please selecteFP Browser (expression)
0.50	78.6	0.83	PtpAffx.90746.1.A1_at	CK094582	-	-	1e+1	At3g02640	unknown protein	O.I.	H.G.	S.X.	Please selecteFP Browser (expression)
0.40	67.0	0.85	PtpAffx.220685.1.S1_at	pmrna37095	aquaporin, MIP family, NIP subfamily	-	2e-2	At2g25810	TIP4	O.I.	H.G.	S.X.	Please selecteFP Browser (expression)
0.11	18.1	0.85	PtpAffx.2076.1.S1_at	CK090455	hypothetical protein	-	5e-1	At5g15910	dehydrogenase-related	O.I.	H.G.	S.X.	Please selecteFP Browser (expression)
0.09	14.6	0.84	PtpAffx.993.5.A1_at	CV243524	-	-	8e-17	At5g51060	RHD2 (ROOT HAIR DEFECTIVE 2)	O.I.	H.G.	S.X.	Please selecteFP Browser (expression)
0.01	2.2	0.83	Ptp.2921.1.A1_at	DN489953	-	-	2e-1	At1g17610	disease resistance protein-related	O.I.	H.G.	S.X.	Please selecteFP Browser (expression)

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
7.0	98.0	GSM244440	Mixed infected tissue, biological rep2	GSE9673	Comparative transcriptomic reveals signatures specific to various interactions with Melampsora rust fungi
6.3	97.7	GSM327661	Populus balsamifera_Male_Catkin_midday_3	GSE13990	Populus balsamifera developmental tissue series
5.2	96.8	GSM327408	Populus balsamifera_1006_root_midday_2	GSE13990	Populus balsamifera developmental tissue series
4.3	95.8	GSM327660	Populus balsamifera_Male_Catkin_midday_2	GSE13990	Populus balsamifera developmental tissue series
4.1	95.5	GSM327407	Populus balsamifera_1006_root_midday_1	GSE13990	Populus balsamifera developmental tissue series
3.6	94.5	GSM327404	Populus balsamifera_1006_young_leaf_midday_1	GSE13990	Populus balsamifera developmental tissue series
3.1	93.2	GSM327409	Populus balsamifera_1006_root_midday_3	GSE13990	Populus balsamifera developmental tissue series
2.9	92.5	GSM362886	Clone1979_LPI2_N-_4w_rep2	GSE14515	Comparative transcriptomics analysis of Populus leaves under nitrogen limitation: clone 1979
2.8	92.1	GSM327406	Populus balsamifera_1006_young_leaf_midday_3	GSE13990	Populus balsamifera developmental tissue series
2.6	91.3	GSM328066	Populus x canescens leaf control_rep_04	GSE13109	Effect of hypoxia on gene expression in Grey poplar

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Hordeum_vulgare

Oryza_sativa

Triticum_aestivum

Vitis_vinifera

Zea_mays

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