Co-expression analysis

Gene ID	PtpAffx.205632.1.S1_at
Gene name	hypothetical protein
Homology with Arabidopsis	Similar to At1g34120: IP5PI (INOSITOL POLYPHOSPHATE 5-PHOSPHATASE I) (HF=9e-10)
Module size	6 genes
NF	0.04
%ile	8.5

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.50	78.6	0.86	PtpAffx.205632.1.S1_at	pmrna11124	hypothetical protein	-	9e-10	At1g34120	IP5PI (INOSITOL POLYPHOSPHATE 5-PHOSPHATASE I)	O.I.	H.G.	S.X.	Please selecteFP Browser (expression)
0.60	86.0	0.86	PtpAffx.220291.1.S1_at	pmrna36661	hypothetical protein	-	1e+0	At3g01327	-	O.I.	H.G.	S.X.	Please selecteFP Browser (expression)
0.15	25.3	0.87	PtpAffx.17213.2.S1_at	CA930536	hypothetical protein	-	2e-14	At4g01940	NFU1	O.I.	H.G.	S.X.	Please selecteFP Browser (expression)
0.04	6.9	0.88	Ptp.2080.1.S1_at	CX653977	hypothetical protein	-	8e-47	At4g08790	nitrilase, putative	O.I.	H.G.	S.X.	Please selecteFP Browser (expression)
0.03	5.2	0.87	PtpAffx.201579.1.S1_at	pmrna3098	hypothetical protein	-	1e-6	At3g07860	unknown protein	O.I.	H.G.	S.X.	Please selecteFP Browser (expression)
0.01	2.2	0.86	Ptp.4904.1.S1_s_at	BU832457	hypothetical protein	-	3e-14	At1g29880	glycyl-tRNA synthetase / glycine--tRNA ligase	O.I.	H.G.	S.X.	Please selecteFP Browser (expression)

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
9.0	98.7	GSM327660	Populus balsamifera_Male_Catkin_midday_2	GSE13990	Populus balsamifera developmental tissue series
7.1	98.1	GSM327659	Populus balsamifera_Male_Catkin_midday_1	GSE13990	Populus balsamifera developmental tissue series
3.3	93.7	GSM327656	Populus balsamifera_Female_Catkin_midday_1	GSE13990	Populus balsamifera developmental tissue series
3.1	93.2	GSM327661	Populus balsamifera_Male_Catkin_midday_3	GSE13990	Populus balsamifera developmental tissue series
2.6	91.3	GSM328105	Populus x canescens leaf hypoxia_rep_01	GSE13109	Effect of hypoxia on gene expression in Grey poplar
2.5	90.9	GSM372042	Clone1979_LPI5_N-_8w_rep1	GSE14515	Comparative transcriptomics analysis of Populus leaves under nitrogen limitation: clone 1979
2.5	90.9	GSM327658	Populus balsamifera_Female_Catkin_midday_3	GSE13990	Populus balsamifera developmental tissue series
1.9	87.2	GSM327407	Populus balsamifera_1006_root_midday_1	GSE13990	Populus balsamifera developmental tissue series
1.8	86.4	GSM372098	Clone3200_LPI5_N-_8w_rep2	GSE14893	Comparative transcriptomics analysis of Populus leaves under nitrogen limitation: clone 3200
1.7	85.5	GSM328066	Populus x canescens leaf control_rep_04	GSE13109	Effect of hypoxia on gene expression in Grey poplar

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Hordeum_vulgare

Oryza_sativa

Triticum_aestivum

Vitis_vinifera

Zea_mays

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