Co-expression analysis

Gene ID	PtpAffx.205627.1.S1_at
Gene name	hypothetical protein
Homology with Arabidopsis	Similar to At4g32030: unknown protein (HF=3e-1)
Module size	7 genes
NF	0.08
%ile	16.6

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.67	91.1	0.76	PtpAffx.205627.1.S1_at	pmrna11118	hypothetical protein	-	3e-1	At4g32030	unknown protein	O.I.	H.G.	S.X.	Please selecteFP Browser (expression)
0.21	36.5	0.76	PtpAffx.213304.1.S1_at	pmrna26023	hypothetical protein	-	8e-9	At5g50770	AtHSD6 (hydroxysteroid dehydrogenase 6)	O.I.	H.G.	S.X.	Please selecteFP Browser (expression)
0.21	36.5	0.80	PtpAffx.210378.1.S1_at	pmrna20395	hypothetical protein	-	2e+0	At4g32605	-	O.I.	H.G.	S.X.	Please selecteFP Browser (expression)
0.17	29.1	0.76	PtpAffx.82160.1.A1_at	CV258238	-	-	1e+1	At5g66211	unknown protein	O.I.	H.G.	S.X.	Please selecteFP Browser (expression)
0.16	26.9	0.77	PtpAffx.116640.1.S1_at	CK094610	-	-	1e+0	At5g46780	VQ motif-containing protein	O.I.	H.G.	S.X.	Please selecteFP Browser (expression)
0.09	14.6	0.76	PtpAffx.76226.1.A1_at	CV239972	hypothetical protein	-	1e-6	At5g49460	ACLB-2 (ATP CITRATE LYASE SUBUNIT B 2)	O.I.	H.G.	S.X.	Please selecteFP Browser (expression)
0.03	5.2	0.75	PtpAffx.216067.1.S1_x_at	pmrna30628	hypothetical protein	-	1e-1	At2g43780	unknown protein	O.I.	H.G.	S.X.	Please selecteFP Browser (expression)

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
4.4	95.9	GSM372096	Clone3200_LPI5_N-_4w_rep2	GSE14893	Comparative transcriptomics analysis of Populus leaves under nitrogen limitation: clone 3200
4.1	95.5	GSM327656	Populus balsamifera_Female_Catkin_midday_1	GSE13990	Populus balsamifera developmental tissue series
3.9	95.1	GSM362887	Clone1979_LPI5_N+_4w_rep1	GSE14515	Comparative transcriptomics analysis of Populus leaves under nitrogen limitation: clone 1979
3.1	93.2	GSM372093	Clone3200_LPI5_N+_4w_rep1	GSE14893	Comparative transcriptomics analysis of Populus leaves under nitrogen limitation: clone 3200
3.0	92.9	GSM372090	Clone3200_LPI2_N+_4w_rep2	GSE14893	Comparative transcriptomics analysis of Populus leaves under nitrogen limitation: clone 3200
2.7	91.8	GSM362889	Clone1979_LPI5_N-_4w_rep1	GSE14515	Comparative transcriptomics analysis of Populus leaves under nitrogen limitation: clone 1979
2.5	90.9	GSM362888	Clone1979_LPI5_N+_4w_rep2	GSE14515	Comparative transcriptomics analysis of Populus leaves under nitrogen limitation: clone 1979
2.4	90.4	GSM327661	Populus balsamifera_Male_Catkin_midday_3	GSE13990	Populus balsamifera developmental tissue series
2.2	89.3	GSM362886	Clone1979_LPI2_N-_4w_rep2	GSE14515	Comparative transcriptomics analysis of Populus leaves under nitrogen limitation: clone 1979
2.2	89.3	GSM327660	Populus balsamifera_Male_Catkin_midday_2	GSE13990	Populus balsamifera developmental tissue series

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Hordeum_vulgare

Oryza_sativa

Triticum_aestivum

Vitis_vinifera

Zea_mays

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