Co-expression analysis

Gene ID	PtpAffx.205492.1.S1_at
Gene name	high affinity sulfate transporter SAT-1, Sulfate/bicarbonate/oxalate exchanger SLC26 family protein
Homology with Arabidopsis	Similar to At4g08620: SULTR1 (HF=2e-23)
Module size	11 genes
NF	0.74
%ile	97.6

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.71	92.6	0.84	PtpAffx.205492.1.S1_at	pmrna10859	high affinity sulfate transporter SAT-1, Sulfate/bicarbonate/oxalate exchanger SLC26 family protein	-	2e-23	At4g08620	SULTR1	O.I.	H.G.	S.X.	Please selecteFP Browser (expression)
0.91	99.2	0.89	PtpAffx.5087.1.A1_at	CV262136	phenylcoumaran benzylic ether reductase 3	-	2e-13	At4g39230	isoflavone reductase, putative	O.I.	H.G.	S.X.	Please selecteFP Browser (expression)
0.82	96.3	0.90	Ptp.5125.1.S1_s_at	DN484905	phenylcoumaran benzylic ether reductase 3	-	8e-9	At4g39230	isoflavone reductase, putative	O.I.	H.G.	S.X.	Please selecteFP Browser (expression)
0.80	96.0	0.93	PtpAffx.20815.1.S1_s_at	CV241001	-	-	3e-3	At1g23740	oxidoreductase, zinc-binding dehydrogenase family protein	O.I.	H.G.	S.X.	Please selecteFP Browser (expression)
0.76	94.3	0.90	PtpAffx.17584.1.A1_at	CX170552	hypothetical protein	-	4e-1	At5g24655	LSU4 (RESPONSE TO LOW SULFUR 4)	O.I.	H.G.	S.X.	Please selecteFP Browser (expression)
0.76	94.3	0.92	PtpAffx.107976.1.A1_a_at	CV258384	hypothetical protein	-	2e-2	At5g02780	In2-1 protein, putative	O.I.	H.G.	S.X.	Please selecteFP Browser (expression)
0.73	93.6	0.92	PtpAffx.20815.1.S1_at	CV241001	-	-	3e-3	At1g23740	oxidoreductase, zinc-binding dehydrogenase family protein	O.I.	H.G.	S.X.	Please selecteFP Browser (expression)
0.67	91.1	0.91	PtpAffx.117367.1.A1_s_at	CA924499	amino acid transporter	-	1e-4	At3g56200	amino acid transporter family protein	O.I.	H.G.	S.X.	Please selecteFP Browser (expression)
0.62	87.2	0.88	PtpAffx.71886.2.S1_at	BU881886	methionine sulfoxide reductase type /// methionine sulfoxide reductase type	-	1e-14	At5g07470	PMSR3 (PEPTIDEMETHIONINE SULFOXIDE REDUCTASE 3)	O.I.	H.G.	S.X.	Please selecteFP Browser (expression)
0.62	87.2	0.89	PtpAffx.134355.1.A1_at	CV283298	hypothetical protein	-	2e-2	At3g49570	LSU3 (RESPONSE TO LOW SULFUR 3)	O.I.	H.G.	S.X.	Please selecteFP Browser (expression)
0.56	83.9	0.90	PtpAffx.136723.1.S1_s_at	AJ767586	-	-	3e-52	At1g62180	APR2 (5'ADENYLYLPHOSPHOSULFATE REDUCTASE 2)	O.I.	H.G.	S.X.	Please selecteFP Browser (expression)

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
4.0	95.3	GSM328566	Populus x canescens root hypoxia_rep_08	GSE13109	Effect of hypoxia on gene expression in Grey poplar
3.2	93.5	GSM372096	Clone3200_LPI5_N-_4w_rep2	GSE14893	Comparative transcriptomics analysis of Populus leaves under nitrogen limitation: clone 3200
3.2	93.5	GSM334226	Populus balsamifera_1006_mature_leaf_midday_3	GSE13990	Populus balsamifera developmental tissue series
2.9	92.5	GSM372044	Clone1979_LPI5_N+_8w_rep1	GSE14515	Comparative transcriptomics analysis of Populus leaves under nitrogen limitation: clone 1979
2.7	91.8	GSM372095	Clone3200_LPI5_N-_4w_rep1	GSE14893	Comparative transcriptomics analysis of Populus leaves under nitrogen limitation: clone 3200
2.3	89.8	GSM372092	Clone3200_LPI2_N-_4w_rep2	GSE14893	Comparative transcriptomics analysis of Populus leaves under nitrogen limitation: clone 3200
2.3	89.8	GSM372091	Clone3200_LPI2_N-_4w_rep1	GSE14893	Comparative transcriptomics analysis of Populus leaves under nitrogen limitation: clone 3200
2.3	89.8	GSM328483	Populus x canescens root control_rep_06	GSE13109	Effect of hypoxia on gene expression in Grey poplar
2.2	89.3	GSM327403	Populus balsamifera_20071015_Etiolated_seedling_6d_3	GSE13990	Populus balsamifera developmental tissue series
1.9	87.2	GSM327409	Populus balsamifera_1006_root_midday_3	GSE13990	Populus balsamifera developmental tissue series

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Hordeum_vulgare

Oryza_sativa

Triticum_aestivum

Vitis_vinifera

Zea_mays

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