Co-expression analysis

Gene ID PtpAffx.205492.1.S1_at
Gene name high affinity sulfate transporter SAT-1, Sulfate/bicarbonate/oxalate exchanger SLC26 family protein
Homology with ArabidopsisSimilar to At4g08620: SULTR1 (HF=2e-23)
Module size 11 genes
NF 0.74
%ile 97.6

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.7192.60.84PtpAffx.205492.1.S1_atpmrna10859high affinity sulfate transporter SAT-1, Sulfate/bicarbonate/oxalate exchanger SLC26 family protein-2e-23At4g08620SULTR1O.I.H.G.S.X.
0.9199.20.89PtpAffx.5087.1.A1_atCV262136phenylcoumaran benzylic ether reductase 3-2e-13At4g39230isoflavone reductase, putativeO.I.H.G.S.X.
0.8296.30.90Ptp.5125.1.S1_s_atDN484905phenylcoumaran benzylic ether reductase 3-8e-9At4g39230isoflavone reductase, putativeO.I.H.G.S.X.
0.8096.00.93PtpAffx.20815.1.S1_s_atCV241001--3e-3At1g23740oxidoreductase, zinc-binding dehydrogenase family proteinO.I.H.G.S.X.
0.7694.30.90PtpAffx.17584.1.A1_atCX170552hypothetical protein-4e-1At5g24655LSU4 (RESPONSE TO LOW SULFUR 4)O.I.H.G.S.X.
0.7694.30.92PtpAffx.107976.1.A1_a_atCV258384hypothetical protein-2e-2At5g02780In2-1 protein, putativeO.I.H.G.S.X.
0.7393.60.92PtpAffx.20815.1.S1_atCV241001--3e-3At1g23740oxidoreductase, zinc-binding dehydrogenase family proteinO.I.H.G.S.X.
0.6791.10.91PtpAffx.117367.1.A1_s_atCA924499amino acid transporter-1e-4At3g56200amino acid transporter family proteinO.I.H.G.S.X.
0.6287.20.88PtpAffx.71886.2.S1_atBU881886methionine sulfoxide reductase type /// methionine sulfoxide reductase type-1e-14At5g07470PMSR3 (PEPTIDEMETHIONINE SULFOXIDE REDUCTASE 3)O.I.H.G.S.X.
0.6287.20.89PtpAffx.134355.1.A1_atCV283298hypothetical protein-2e-2At3g49570LSU3 (RESPONSE TO LOW SULFUR 3)O.I.H.G.S.X.
0.5683.90.90PtpAffx.136723.1.S1_s_atAJ767586--3e-52At1g62180APR2 (5'ADENYLYLPHOSPHOSULFATE REDUCTASE 2)O.I.H.G.S.X.

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Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
4.095.3GSM328566Populus x canescens root hypoxia_rep_08GSE13109Effect of hypoxia on gene expression in Grey poplarLink to GEO
3.293.5GSM372096Clone3200_LPI5_N-_4w_rep2GSE14893Comparative transcriptomics analysis of Populus leaves under nitrogen limitation: clone 3200Link to GEO
3.293.5GSM334226Populus balsamifera_1006_mature_leaf_midday_3GSE13990Populus balsamifera developmental tissue seriesLink to GEO
2.992.5GSM372044Clone1979_LPI5_N+_8w_rep1GSE14515Comparative transcriptomics analysis of Populus leaves under nitrogen limitation: clone 1979Link to GEO
2.791.8GSM372095Clone3200_LPI5_N-_4w_rep1GSE14893Comparative transcriptomics analysis of Populus leaves under nitrogen limitation: clone 3200Link to GEO
2.389.8GSM372092Clone3200_LPI2_N-_4w_rep2GSE14893Comparative transcriptomics analysis of Populus leaves under nitrogen limitation: clone 3200Link to GEO
2.389.8GSM372091Clone3200_LPI2_N-_4w_rep1GSE14893Comparative transcriptomics analysis of Populus leaves under nitrogen limitation: clone 3200Link to GEO
2.389.8GSM328483Populus x canescens root control_rep_06GSE13109Effect of hypoxia on gene expression in Grey poplarLink to GEO
2.289.3GSM327403Populus balsamifera_20071015_Etiolated_seedling_6d_3GSE13990Populus balsamifera developmental tissue seriesLink to GEO
1.987.2GSM327409Populus balsamifera_1006_root_midday_3GSE13990Populus balsamifera developmental tissue seriesLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Triticum_aestivum
Vitis_vinifera
Zea_mays



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