Co-expression analysis

Gene ID PtpAffx.205177.1.S1_at
Gene name hypothetical protein
Homology with ArabidopsisSimilar to At5g10260: AtRABH1e (Arabidopsis Rab GTPase homolog H1e) (HF=4e-93)
Module size 6 genes
NF 0.20
%ile 38.1

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.5380.50.91PtpAffx.205177.1.S1_atpmrna10251hypothetical protein-4e-93At5g10260AtRABH1e (Arabidopsis Rab GTPase homolog H1e)O.I.H.G.S.X.
0.6187.00.90PtpAffx.225253.1.S1_atpmrna44474hypothetical protein-1e-2At5g44410FAD-binding domain-containing proteinO.I.H.G.S.X.
0.5582.20.92PtpAffx.161461.1.S1_atCV130586hypothetical protein-1e-49At3g57550AGK2 (GUANYLATE KINASE)O.I.H.G.S.X.
0.1423.50.90PtpAffx.159916.1.A1_atCV255317hypothetical protein-1e+0At5g02090unknown proteinO.I.H.G.S.X.
0.1321.60.90Ptp.7558.1.A1_atCA926122hypothetical protein-6e-71At5g13490AAC2 (ADP/ATP carrier 2)O.I.H.G.S.X.
0.1016.30.91PtpAffx.224513.1.S1_s_atpmrna43126hypothetical protein-1e-5At4g19810glycosyl hydrolase family 18 proteinO.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
7.398.2GSM327661Populus balsamifera_Male_Catkin_midday_3GSE13990Populus balsamifera developmental tissue seriesLink to GEO
6.097.5GSM327404Populus balsamifera_1006_young_leaf_midday_1GSE13990Populus balsamifera developmental tissue seriesLink to GEO
3.995.1GSM327660Populus balsamifera_Male_Catkin_midday_2GSE13990Populus balsamifera developmental tissue seriesLink to GEO
3.995.1GSM362888Clone1979_LPI5_N+_4w_rep2GSE14515Comparative transcriptomics analysis of Populus leaves under nitrogen limitation: clone 1979Link to GEO
3.494.0GSM362887Clone1979_LPI5_N+_4w_rep1GSE14515Comparative transcriptomics analysis of Populus leaves under nitrogen limitation: clone 1979Link to GEO
2.892.1GSM327413Populus balsamifera_1006_differentiating_xylem_midday_3GSE13990Populus balsamifera developmental tissue seriesLink to GEO
2.791.8GSM372089Clone3200_LPI2_N+_4w_rep1GSE14893Comparative transcriptomics analysis of Populus leaves under nitrogen limitation: clone 3200Link to GEO
1.987.2GSM327281Populus balsamifera_20071015_Seedling_continuous_light_6d_1GSE13990Populus balsamifera developmental tissue seriesLink to GEO
1.987.2GSM327657Populus balsamifera_Female_Catkin_midday_2GSE13990Populus balsamifera developmental tissue seriesLink to GEO
1.684.5GSM327359Populus balsamifera_20071015_Seedling_continuous_light_6d_3GSE13990Populus balsamifera developmental tissue seriesLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Triticum_aestivum
Vitis_vinifera
Zea_mays



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