Co-expression analysis

Gene ID PtpAffx.204918.1.S1_at
Gene name hypothetical protein
Homology with ArabidopsisSimilar to At1g07290: nucleotide-sugar transmembrane transporter (HF=6e-19)
Module size 20 genes
NF 0.10
%ile 20.1

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.8697.40.84PtpAffx.204918.1.S1_atpmrna9724hypothetical protein-6e-19At1g07290nucleotide-sugar transmembrane transporterO.I.H.G.S.X.
0.2747.10.88PtpAffx.212480.1.S1_atpmrna24447hypothetical protein-5e-3At4g12690unknown proteinO.I.H.G.S.X.
0.2441.80.96Ptp.7565.1.S1_atCV269696hypothetical protein-1e-7At4g26210mitochondrial ATP synthase g subunit family proteinO.I.H.G.S.X.
0.2340.50.91Ptp.2706.1.S1_atCK093711--3e-5At4g25240SKS1 (SKU5 SIMILAR 1)O.I.H.G.S.X.
0.1932.70.95Ptp.5858.1.S1_atCV246018hypothetical protein-3e-17At3g18410NADH-ubiquinone oxidoreductase-relatedO.I.H.G.S.X.
0.1830.80.91PtpAffx.205456.1.S1_atpmrna10787hypothetical protein-1e-2At1g30475-O.I.H.G.S.X.
0.1830.80.95PtpAffx.42648.1.S1_atCV260478hypothetical protein-7e-27At1g15120ubiquinol-cytochrome C reductase complex 7.8 kDa protein, putative / mitochondrial hinge protein, putativeO.I.H.G.S.X.
0.1729.10.97PtpAffx.25435.1.A1_x_atCV233869hypothetical protein-2e+0At5g43460lesion inducing protein-relatedO.I.H.G.S.X.
0.1729.10.88Ptp.1992.1.A1_atBU836415hypothetical protein-4e-16At5g65020ANNAT2 (Annexin Arabidopsis 2)O.I.H.G.S.X.
0.1118.10.94PtpAffx.89508.1.S1_atBU814952--7e-1At2g43280far-red impaired responsive family protein / FAR1 family proteinO.I.H.G.S.X.
0.1016.30.94Ptp.2318.1.S1_atCV258504hypothetical protein-4e-38At2g40800-O.I.H.G.S.X.
0.1016.30.95Ptp.2493.1.A1_atCK093296hypothetical protein-8e-5At5g24260prolyl oligopeptidase family proteinO.I.H.G.S.X.
0.1016.30.93Ptp.89.1.S1_s_atCV236988hypothetical protein-4e-1At2g02510unknown proteinO.I.H.G.S.X.
0.0812.90.90PtpAffx.24385.1.A1_atCV267930--3e-14At5g65270AtRABA4a (Arabidopsis Rab GTPase homolog A4a)O.I.H.G.S.X.
0.069.80.92Ptp.4804.1.A1_atDN490277hypothetical protein-1e-6At3g22200POP2 (POLLEN-PISTIL INCOMPATIBILITY 2)O.I.H.G.S.X.
0.069.80.94Ptp.158.1.S1_atCK0874045-formyltetrahydrofolate cyclo-ligase-6e+0At5g35300unknown proteinO.I.H.G.S.X.
0.046.90.91PtpAffx.56511.1.A1_atCV262453hypothetical protein-2e-12At2g30580DRIP2 (DREB2A-INTERACTING PROTEIN 2)O.I.H.G.S.X.
0.046.90.91PtpAffx.28694.1.S1_atCV226753hypothetical protein-5e-4At1g27390TOM20-2 (TRANSLOCASE OUTER MEMBRANE 20-2)O.I.H.G.S.X.
0.035.20.91PtpAffx.75641.1.A1_atCV262488hypothetical protein-5e+0At3g47836unknown proteinO.I.H.G.S.X.
0.035.20.91PtpAffx.12377.1.A1_atCV229531hypothetical protein-8e-1At3g02860zinc ion bindingO.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
3.494.0GSM327411Populus balsamifera_1006_differentiating_xylem_midday_1GSE13990Populus balsamifera developmental tissue seriesLink to GEO
3.393.7GSM327412Populus balsamifera_1006_differentiating_xylem_midday_2GSE13990Populus balsamifera developmental tissue seriesLink to GEO
2.992.5GSM136938Poplar contacted with P. aeruginosa PAO1 in 1 x hrp + 0.25 % sucroseGSE5887Pseudomonas aeruginosa PAO1 virulent genes in the poplar rhizosphereLink to GEO
2.691.3GSM327658Populus balsamifera_Female_Catkin_midday_3GSE13990Populus balsamifera developmental tissue seriesLink to GEO
2.590.9GSM327659Populus balsamifera_Male_Catkin_midday_1GSE13990Populus balsamifera developmental tissue seriesLink to GEO
2.490.4GSM327413Populus balsamifera_1006_differentiating_xylem_midday_3GSE13990Populus balsamifera developmental tissue seriesLink to GEO
2.490.4GSM327657Populus balsamifera_Female_Catkin_midday_2GSE13990Populus balsamifera developmental tissue seriesLink to GEO
1.886.4GSM328066Populus x canescens leaf control_rep_04GSE13109Effect of hypoxia on gene expression in Grey poplarLink to GEO
1.785.5GSM328059Populus x canescens leaf control_rep_01GSE13109Effect of hypoxia on gene expression in Grey poplarLink to GEO
1.785.5GSM328105Populus x canescens leaf hypoxia_rep_01GSE13109Effect of hypoxia on gene expression in Grey poplarLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Triticum_aestivum
Vitis_vinifera
Zea_mays



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