Co-expression analysis

Gene ID PtpAffx.204878.1.S1_at
Gene name NAC domain protein, IPR003441
Homology with ArabidopsisSimilar to At5g63790: ANAC102 (ARABIDOPSIS NAC DOMAIN CONTAINING PROTEIN 102) (HF=1e-2)
Module size 24 genes
NF 0.13
%ile 25.7

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.6891.30.74PtpAffx.204878.1.S1_atpmrna9641NAC domain protein, IPR003441-1e-2At5g63790ANAC102 (ARABIDOPSIS NAC DOMAIN CONTAINING PROTEIN 102)O.I.H.G.S.X.
0.3661.60.89PtpAffx.219997.1.S1_atpmrna36225hypothetical protein-7e-10At4g16970ATP binding / kinase/ protein kinase/ protein serine/threonine kinaseO.I.H.G.S.X.
0.2645.20.85PtpAffx.213668.1.S1_atpmrna26689hypothetical protein-1e-25At3g51740IMK2 (INFLORESCENCE MERISTEM RECEPTOR-LIKE KINASE 2)O.I.H.G.S.X.
0.2441.80.89PtpAffx.225505.1.S1_atpmrna44896hypothetical protein-5e-35At2g36400AtGRF3 (GROWTH-REGULATING FACTOR 3)O.I.H.G.S.X.
0.2340.50.83PtpAffx.205188.1.S1_atpmrna10274hypothetical protein-2e+0At5g65120unknown proteinO.I.H.G.S.X.
0.2340.50.80PtpAffx.211672.1.S1_atpmrna22880hypothetical protein-5e-3At2g46980unknown proteinO.I.H.G.S.X.
0.2340.50.83PtpAffx.43550.1.A1_atCV267290--8e-1At5g42850-O.I.H.G.S.X.
0.2136.50.90PtpAffx.42652.1.S1_atCV268229histone H3-1e-1At1g01370HTR12O.I.H.G.S.X.
0.2136.50.86PtpAffx.2265.9.A1_atCV234913hypothetical protein-4e+0At4g13968-O.I.H.G.S.X.
0.1932.70.87PtpAffx.201290.1.S1_atpmrna2561hypothetical protein-7e-16At5g55820unknown proteinO.I.H.G.S.X.
0.1932.70.90PtpAffx.206221.1.S1_atpmrna12349hypothetical protein-1e-3At5g61270PIF7 (PHYTOCHROME-INTERACTING FACTOR7)O.I.H.G.S.X.
0.1830.80.85PtpAffx.120971.1.A1_atCV258390--2e-6At3g09730unknown proteinO.I.H.G.S.X.
0.1830.80.90PtpAffx.206613.1.S1_atpmrna13130hypothetical protein-4e-1At1g66420transcription regulatorO.I.H.G.S.X.
0.1626.90.89Ptp.4172.1.A1_atCV242570hypothetical protein-2e-4At3g61790seven in absentia (SINA) family proteinO.I.H.G.S.X.
0.1525.30.89PtpAffx.75767.1.A1_atCV258069hypothetical protein-2e-2At1g56670GDSL-motif lipase/hydrolase family proteinO.I.H.G.S.X.
0.1423.50.86PtpAffx.213126.1.S1_atpmrna25688hypothetical protein-5e-1At4g17240unknown proteinO.I.H.G.S.X.
0.1423.50.86Ptp.6422.1.A1_s_atCV240405hypothetical protein-2e-12At2g39700ATEXPA4 (ARABIDOPSIS THALIANA EXPANSIN A4)O.I.H.G.S.X.
0.1016.30.86PtpAffx.206215.1.S1_atpmrna12339hypothetical protein-6e-19At2g45490AtAUR3 (ATAURORA3)O.I.H.G.S.X.
0.1016.30.86PtpAffx.203406.1.S1_atpmrna6774hypothetical protein-2e-1At1g71830SERK1 (SOMATIC EMBRYOGENESIS RECEPTOR-LIKE KINASE 1)O.I.H.G.S.X.
0.0812.90.86PtpAffx.18931.1.A1_atCV228550--9e-8At1g80190PSF1 (PARTNER OF SLD FIVE 1)O.I.H.G.S.X.
0.0812.90.84PtpAffx.224871.1.S1_atpmrna43763hypothetical protein-3e-15At2g45480AtGRF9 (GROWTH-REGULATING FACTOR 9)O.I.H.G.S.X.
0.0812.90.77PtpAffx.218070.1.S1_atpmrna33591hypothetical protein-5e-1At3g12870unknown proteinO.I.H.G.S.X.
0.0711.60.84Ptp.2751.1.S1_atDN490334condensin complex components subunit /// condensin complex components subunit-1e-87At3g47460ATSMC2O.I.H.G.S.X.
0.023.60.82PtpAffx.213046.1.S1_atpmrna25532hypothetical protein-8e-8At4g25430unknown proteinO.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
3.193.2GSM327660Populus balsamifera_Male_Catkin_midday_2GSE13990Populus balsamifera developmental tissue seriesLink to GEO
2.892.1GSM327398Populus balsamifera_20071015_Etiolated_seedling_6d_transfered_to_light_3h_3GSE13990Populus balsamifera developmental tissue seriesLink to GEO
2.892.1GSM327380Populus balsamifera_20071015_Etiolated_seedling_6d_transfered_to_light_3h_1GSE13990Populus balsamifera developmental tissue seriesLink to GEO
2.389.8GSM327411Populus balsamifera_1006_differentiating_xylem_midday_1GSE13990Populus balsamifera developmental tissue seriesLink to GEO
2.389.8GSM327404Populus balsamifera_1006_young_leaf_midday_1GSE13990Populus balsamifera developmental tissue seriesLink to GEO
2.389.8GSM327409Populus balsamifera_1006_root_midday_3GSE13990Populus balsamifera developmental tissue seriesLink to GEO
2.289.3GSM328275Populus x canescens leaf hypoxia_rep_03GSE13109Effect of hypoxia on gene expression in Grey poplarLink to GEO
2.088.0GSM327397Populus balsamifera_20071015_Etiolated_seedling_6d_transfered_to_light_3h_2GSE13990Populus balsamifera developmental tissue seriesLink to GEO
1.886.4GSM328532Populus x canescens root hypoxia_rep_02GSE13109Effect of hypoxia on gene expression in Grey poplarLink to GEO
1.785.5GSM327412Populus balsamifera_1006_differentiating_xylem_midday_2GSE13990Populus balsamifera developmental tissue seriesLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Triticum_aestivum
Vitis_vinifera
Zea_mays



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