Co-expression analysis

Gene ID	PtpAffx.204686.1.S1_at
Gene name	hypothetical protein
Homology with Arabidopsis	Similar to At3g19430: late embryogenesis abundant protein-related / LEA protein-related (HF=2e-18)
Module size	6 genes
NF	0.00
%ile	0.2

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.67	91.1	0.74	PtpAffx.204686.1.S1_at	pmrna9231	hypothetical protein	-	2e-18	At3g19430	late embryogenesis abundant protein-related / LEA protein-related	O.I.	H.G.	S.X.	Please selecteFP Browser (expression)
0.23	40.5	0.78	PtpAffx.222491.1.S1_at	pmrna39952	hypothetical protein	-	8e-1	At2g47270	transcription factor/ transcription regulator	O.I.	H.G.	S.X.	Please selecteFP Browser (expression)
0.01	2.2	0.74	PtpAffx.207947.1.S1_at	pmrna15771	hypothetical protein	-	2e-1	At4g22950	AGL19 (AGAMOUS-LIKE 19)	O.I.	H.G.	S.X.	Please selecteFP Browser (expression)
-	0.4	0.78	PtpAffx.6105.4.S1_at	CV266789	hypothetical protein	-	7e-2	At3g48890	ATMP2	O.I.	H.G.	S.X.	Please selecteFP Browser (expression)
-	0.4	0.78	PtpAffx.211535.1.S1_at	pmrna22605	hypothetical protein	-	6e-2	At5g19800	hydroxyproline-rich glycoprotein family protein	O.I.	H.G.	S.X.	Please selecteFP Browser (expression)
-	0.4	0.80	RPTR-Ptp-J01636-1_at	RPTR-Ptp-J01636-1	-	-			-	O.I.	H.G.	S.X.	Please selecteFP Browser (expression)

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
5.8	97.4	GSM327660	Populus balsamifera_Male_Catkin_midday_2	GSE13990	Populus balsamifera developmental tissue series
5.4	97.0	GSM327404	Populus balsamifera_1006_young_leaf_midday_1	GSE13990	Populus balsamifera developmental tissue series
4.1	95.5	GSM372044	Clone1979_LPI5_N+_8w_rep1	GSE14515	Comparative transcriptomics analysis of Populus leaves under nitrogen limitation: clone 1979
3.5	94.3	GSM372089	Clone3200_LPI2_N+_4w_rep1	GSE14893	Comparative transcriptomics analysis of Populus leaves under nitrogen limitation: clone 3200
3.2	93.5	GSM362889	Clone1979_LPI5_N-_4w_rep1	GSE14515	Comparative transcriptomics analysis of Populus leaves under nitrogen limitation: clone 1979
3.1	93.2	GSM327659	Populus balsamifera_Male_Catkin_midday_1	GSE13990	Populus balsamifera developmental tissue series
2.8	92.1	GSM362883	Clone1979_LPI2_N+_4w_rep1	GSE14515	Comparative transcriptomics analysis of Populus leaves under nitrogen limitation: clone 1979
2.8	92.1	GSM372097	Clone3200_LPI5_N-_8w_rep1	GSE14893	Comparative transcriptomics analysis of Populus leaves under nitrogen limitation: clone 3200
2.7	91.8	GSM372096	Clone3200_LPI5_N-_4w_rep2	GSE14893	Comparative transcriptomics analysis of Populus leaves under nitrogen limitation: clone 3200
2.6	91.3	GSM372092	Clone3200_LPI2_N-_4w_rep2	GSE14893	Comparative transcriptomics analysis of Populus leaves under nitrogen limitation: clone 3200

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Hordeum_vulgare

Oryza_sativa

Triticum_aestivum

Vitis_vinifera

Zea_mays

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