Co-expression analysis

Gene ID PtpAffx.203780.1.S1_at
Gene name hypothetical protein
Homology with ArabidopsisSimilar to At3g09020: alpha 1,4-glycosyltransferase family protein / glycosyltransferase sugar-binding DXD motif-containing protein (HF=1e-4)
Module size 6 genes
NF 0.51
%ile 81.4

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.9199.20.95PtpAffx.203780.1.S1_atpmrna7465hypothetical protein-1e-4At3g09020alpha 1,4-glycosyltransferase family protein / glycosyltransferase sugar-binding DXD motif-containing proteinO.I.H.G.S.X.
0.6791.10.95PtpAffx.158656.2.S1_atCX654035hypothetical protein-1e-4At3g08030unknown proteinO.I.H.G.S.X.
0.5078.60.96PtpAffx.224333.1.S1_x_atpmrna42787hypothetical protein-1e-1At1g74090SOT18 (DESULFO-GLUCOSINOLATE SULFOTRANSFERASE 18)O.I.H.G.S.X.
0.5078.60.96PtpAffx.224333.1.S1_atpmrna42787hypothetical protein-1e-1At1g74090SOT18 (DESULFO-GLUCOSINOLATE SULFOTRANSFERASE 18)O.I.H.G.S.X.
0.4673.70.95Ptp.325.1.A1_s_atCK088352cytochrome P450-7e-3At1g01190CYP78A8O.I.H.G.S.X.
0.2136.50.95PtpAffx.54756.1.S1_atBU830852hypothetical protein-2e-1At1g76070unknown proteinO.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
5.396.9GSM327660Populus balsamifera_Male_Catkin_midday_2GSE13990Populus balsamifera developmental tissue seriesLink to GEO
4.395.8GSM328275Populus x canescens leaf hypoxia_rep_03GSE13109Effect of hypoxia on gene expression in Grey poplarLink to GEO
3.995.1GSM327408Populus balsamifera_1006_root_midday_2GSE13990Populus balsamifera developmental tissue seriesLink to GEO
3.794.7GSM328105Populus x canescens leaf hypoxia_rep_01GSE13109Effect of hypoxia on gene expression in Grey poplarLink to GEO
3.694.5GSM328284Populus x canescens root control_rep_03GSE13109Effect of hypoxia on gene expression in Grey poplarLink to GEO
3.694.5GSM327407Populus balsamifera_1006_root_midday_1GSE13990Populus balsamifera developmental tissue seriesLink to GEO
3.092.9GSM328566Populus x canescens root hypoxia_rep_08GSE13109Effect of hypoxia on gene expression in Grey poplarLink to GEO
2.892.1GSM328557Populus x canescens root control_rep_08GSE13109Effect of hypoxia on gene expression in Grey poplarLink to GEO
2.791.8GSM328292Populus x canescens root control_rep_05GSE13109Effect of hypoxia on gene expression in Grey poplarLink to GEO
2.490.4GSM328534Populus x canescens root control_rep_07GSE13109Effect of hypoxia on gene expression in Grey poplarLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Triticum_aestivum
Vitis_vinifera
Zea_mays



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