Co-expression analysis

Gene ID PtpAffx.203415.1.S1_at
Gene name hypothetical protein
Homology with ArabidopsisSimilar to At1g80730: ZFP1 (ZINC-FINGER PROTEIN 1) (HF=3e+0)
Module size 18 genes
NF 0.37
%ile 63.8

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.9799.90.99PtpAffx.203415.1.S1_atpmrna6798hypothetical protein-3e+0At1g80730ZFP1 (ZINC-FINGER PROTEIN 1)O.I.H.G.S.X.
0.6488.41.00PtpAffx.208286.1.S1_atpmrna16478hypothetical protein-6e-10At3g26430GDSL-motif lipase/hydrolase family proteinO.I.H.G.S.X.
0.6187.00.99PtpAffx.6302.1.S1_s_atBU880308hypothetical protein-1e-23At4g34200EDA9 (embryo sac development arrest 9)O.I.H.G.S.X.
0.5984.91.00PtpAffx.153441.1.A1_atCV256979hypothetical protein-4e-4At5g25340unknown proteinO.I.H.G.S.X.
0.4774.61.00PtpAffx.153010.2.A1_atCV266721--1e-18At5g20810auxin-responsive protein, putative / small auxin up RNA (SAUR_B)O.I.H.G.S.X.
0.4774.61.00PtpAffx.206714.1.S1_atpmrna13334hypothetical protein-9e-2At3g52480unknown proteinO.I.H.G.S.X.
0.4774.60.99PtpAffx.205287.1.S1_atpmrna10479hypothetical protein-3e-7At4g35300TMT2 (TONOPLAST MONOSACCHARIDE TRANSPORTER2)O.I.H.G.S.X.
0.4067.00.99PtpAffx.209896.1.S1_atpmrna19502hypothetical protein-1e-8At5g45820CIPK20 (CBL-INTERACTING PROTEIN KINASE 20)O.I.H.G.S.X.
0.3762.30.99PtpAffx.201118.1.S1_atpmrna2202hypothetical protein-3e-8At5g09430hydrolaseO.I.H.G.S.X.
0.3661.60.99PtpAffx.202244.1.S1_atpmrna4499hypothetical protein-4e-1At4g12825-O.I.H.G.S.X.
0.3357.51.00PtpAffx.204669.1.S1_atpmrna9191hypothetical protein-2e-1At1g27020unknown proteinO.I.H.G.S.X.
0.3153.71.00PtpAffx.200438.1.S1_atpmrna880hypothetical protein-2e-2At3g55770LIM domain-containing proteinO.I.H.G.S.X.
0.3052.01.00PtpAffx.201550.1.S1_atpmrna3045hypothetical protein-1e-12At5g42340binding / ubiquitin-protein ligaseO.I.H.G.S.X.
0.3052.01.00PtpAffx.48208.1.S1_atDN492010hypothetical protein-2e-18At1g17030unknown proteinO.I.H.G.S.X.
0.2850.51.00PtpAffx.218500.1.S1_atpmrna34148multidrug/pheromone exporter, MDR family, ABC transporter family-1e-10At4g18050PGP9 (P-GLYCOPROTEIN 9)O.I.H.G.S.X.
0.2747.11.00PtpAffx.33998.1.A1_atDN492215--1e-1At4g13720inosine triphosphate pyrophosphatase, putative / HAM1 family proteinO.I.H.G.S.X.
0.2543.61.00PtpAffx.208575.1.S1_atpmrna17005hypothetical protein-2e-9At4g28556RIC7O.I.H.G.S.X.
0.1729.10.99PtpAffx.209129.1.S1_atpmrna18068hypothetical protein-1e-19At1g69330zinc finger (C3HC4-type RING finger) family proteinO.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
5.096.6GSM327661Populus balsamifera_Male_Catkin_midday_3GSE13990Populus balsamifera developmental tissue seriesLink to GEO
4.095.3GSM136938Poplar contacted with P. aeruginosa PAO1 in 1 x hrp + 0.25 % sucroseGSE5887Pseudomonas aeruginosa PAO1 virulent genes in the poplar rhizosphereLink to GEO
3.193.2GSM327660Populus balsamifera_Male_Catkin_midday_2GSE13990Populus balsamifera developmental tissue seriesLink to GEO
2.590.9GSM136936Poplar in 1 x hrp + 0.25 % sucrose no bacteriaGSE5887Pseudomonas aeruginosa PAO1 virulent genes in the poplar rhizosphereLink to GEO
2.590.9GSM328484Populus x canescens root hypoxia_rep_01GSE13109Effect of hypoxia on gene expression in Grey poplarLink to GEO
2.088.0GSM362886Clone1979_LPI2_N-_4w_rep2GSE14515Comparative transcriptomics analysis of Populus leaves under nitrogen limitation: clone 1979Link to GEO
2.088.0GSM327659Populus balsamifera_Male_Catkin_midday_1GSE13990Populus balsamifera developmental tissue seriesLink to GEO
1.987.2GSM372095Clone3200_LPI5_N-_4w_rep1GSE14893Comparative transcriptomics analysis of Populus leaves under nitrogen limitation: clone 3200Link to GEO
1.684.5GSM327405Populus balsamifera_1006_young_leaf_midday_2GSE13990Populus balsamifera developmental tissue seriesLink to GEO
1.684.5GSM362890Clone1979_LPI5_N-_4w_rep2GSE14515Comparative transcriptomics analysis of Populus leaves under nitrogen limitation: clone 1979Link to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Triticum_aestivum
Vitis_vinifera
Zea_mays



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