Co-expression analysis

Gene ID PtpAffx.203064.1.S1_at
Gene name autoinhibited calcium ATPase
Homology with ArabidopsisSimilar to At4g37640: ACA2 (CALCIUM ATPASE 2) (HF=3e-82)
Module size 7 genes
NF 0.29
%ile 51.4

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.6791.10.96PtpAffx.203064.1.S1_atpmrna6068autoinhibited calcium ATPase-3e-82At4g37640ACA2 (CALCIUM ATPASE 2)O.I.H.G.S.X.
0.6086.00.97PtpAffx.205756.1.S1_atpmrna11366high affinity inorganic phosphate transporter-1e-46At2g38940ATPT2 (ARABIDOPSIS THALIANA PHOSPHATE TRANSPORTER 2)O.I.H.G.S.X.
0.5582.20.97PtpAffx.213733.1.S1_atpmrna26803aminophospholipid ATPase-1e-13At5g04930ALA1 (aminophospholipid ATPase1)O.I.H.G.S.X.
0.2543.60.97Ptp.2445.1.S1_atCK093678hypothetical protein-3e-11At1g76160sks5 (SKU5 Similar 5)O.I.H.G.S.X.
0.2034.60.96Ptp.7607.1.S1_s_atBU813493hypothetical protein-2e+0At5g13220JAZ10 (JASMONATE-ZIM-DOMAIN PROTEIN 10)O.I.H.G.S.X.
0.1626.90.96PtpAffx.201589.1.S1_atpmrna3127hypothetical protein-6e-1At1g28190unknown proteinO.I.H.G.S.X.
0.1626.90.97PtpAffx.114811.1.A1_atCV242821hypothetical protein-4e-4At1g47128RD21 (responsive to dehydration 21)O.I.H.G.S.X.

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Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
4.495.9GSM328532Populus x canescens root hypoxia_rep_02GSE13109Effect of hypoxia on gene expression in Grey poplarLink to GEO
3.694.5GSM328281Populus x canescens root control_rep_02GSE13109Effect of hypoxia on gene expression in Grey poplarLink to GEO
3.694.5GSM328561Populus x canescens root control_rep_12GSE13109Effect of hypoxia on gene expression in Grey poplarLink to GEO
2.892.1GSM328533Populus x canescens root hypoxia_rep_03GSE13109Effect of hypoxia on gene expression in Grey poplarLink to GEO
2.892.1GSM328557Populus x canescens root control_rep_08GSE13109Effect of hypoxia on gene expression in Grey poplarLink to GEO
2.892.1GSM328558Populus x canescens root control_rep_09GSE13109Effect of hypoxia on gene expression in Grey poplarLink to GEO
2.892.1GSM328277Populus x canescens root control_rep_01GSE13109Effect of hypoxia on gene expression in Grey poplarLink to GEO
2.892.1GSM328292Populus x canescens root control_rep_05GSE13109Effect of hypoxia on gene expression in Grey poplarLink to GEO
2.791.8GSM328559Populus x canescens root control_rep_10GSE13109Effect of hypoxia on gene expression in Grey poplarLink to GEO
2.590.9GSM328560Populus x canescens root control_rep_11GSE13109Effect of hypoxia on gene expression in Grey poplarLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Triticum_aestivum
Vitis_vinifera
Zea_mays



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