Co-expression analysis

Gene ID PtpAffx.20278.2.A1_s_at
Gene name hypothetical protein
Homology with ArabidopsisSimilar to At4g28950: ROP9 (RHO-RELATED PROTEIN FROM PLANTS 9) (HF=3e-20)
Module size 7 genes
NF 0.66
%ile 93.9

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.5683.90.94PtpAffx.20278.2.A1_s_atCV244932hypothetical protein-3e-20At4g28950ROP9 (RHO-RELATED PROTEIN FROM PLANTS 9)O.I.H.G.S.X.
0.7192.60.95Ptp.759.1.S1_atCV259673tubulin alpha-7 chain-1e-82At4g14960TUA6O.I.H.G.S.X.
0.7192.60.95PtpAffx.200879.1.S1_atpmrna1723hypothetical protein-2e-6At2g26760CYCB1O.I.H.G.S.X.
0.6791.10.95Ptp.4412.2.S1_s_atCV237391hypothetical protein-1e-57At2g25880AtAUR2 (AtAurora2)O.I.H.G.S.X.
0.6388.10.94PtpAffx.86796.1.A1_atDN490220hypothetical protein-1e-14At2g26180IQD6 (IQ-domain 6)O.I.H.G.S.X.
0.5984.90.94Ptp.5638.1.S1_atDN489006hypothetical protein-6e-14At1g76310CYCB2O.I.H.G.S.X.
0.5279.40.94Ptp.6857.2.S1_s_atCA923790hypothetical protein-1e-1At4g35620CYCB2O.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
9.498.8GSM327661Populus balsamifera_Male_Catkin_midday_3GSE13990Populus balsamifera developmental tissue seriesLink to GEO
5.997.4GSM327660Populus balsamifera_Male_Catkin_midday_2GSE13990Populus balsamifera developmental tissue seriesLink to GEO
4.896.4GSM327659Populus balsamifera_Male_Catkin_midday_1GSE13990Populus balsamifera developmental tissue seriesLink to GEO
4.495.9GSM327656Populus balsamifera_Female_Catkin_midday_1GSE13990Populus balsamifera developmental tissue seriesLink to GEO
4.395.8GSM334224Populus balsamifera_1006_mature_leaf_midday_1GSE13990Populus balsamifera developmental tissue seriesLink to GEO
3.494.0GSM327404Populus balsamifera_1006_young_leaf_midday_1GSE13990Populus balsamifera developmental tissue seriesLink to GEO
3.393.7GSM327658Populus balsamifera_Female_Catkin_midday_3GSE13990Populus balsamifera developmental tissue seriesLink to GEO
3.193.2GSM327405Populus balsamifera_1006_young_leaf_midday_2GSE13990Populus balsamifera developmental tissue seriesLink to GEO
2.791.8GSM327657Populus balsamifera_Female_Catkin_midday_2GSE13990Populus balsamifera developmental tissue seriesLink to GEO
2.289.3GSM327406Populus balsamifera_1006_young_leaf_midday_3GSE13990Populus balsamifera developmental tissue seriesLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Triticum_aestivum
Vitis_vinifera
Zea_mays



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