Co-expression analysis

Gene ID	PtpAffx.20278.2.A1_s_at
Gene name	hypothetical protein
Homology with Arabidopsis	Similar to At4g28950: ROP9 (RHO-RELATED PROTEIN FROM PLANTS 9) (HF=3e-20)
Module size	7 genes
NF	0.66
%ile	93.9

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.56	83.9	0.94	PtpAffx.20278.2.A1_s_at	CV244932	hypothetical protein	-	3e-20	At4g28950	ROP9 (RHO-RELATED PROTEIN FROM PLANTS 9)	O.I.	H.G.	S.X.	Please selecteFP Browser (expression)
0.71	92.6	0.95	Ptp.759.1.S1_at	CV259673	tubulin alpha-7 chain	-	1e-82	At4g14960	TUA6	O.I.	H.G.	S.X.	Please selecteFP Browser (expression)
0.71	92.6	0.95	PtpAffx.200879.1.S1_at	pmrna1723	hypothetical protein	-	2e-6	At2g26760	CYCB1	O.I.	H.G.	S.X.	Please selecteFP Browser (expression)
0.67	91.1	0.95	Ptp.4412.2.S1_s_at	CV237391	hypothetical protein	-	1e-57	At2g25880	AtAUR2 (AtAurora2)	O.I.	H.G.	S.X.	Please selecteFP Browser (expression)
0.63	88.1	0.94	PtpAffx.86796.1.A1_at	DN490220	hypothetical protein	-	1e-14	At2g26180	IQD6 (IQ-domain 6)	O.I.	H.G.	S.X.	Please selecteFP Browser (expression)
0.59	84.9	0.94	Ptp.5638.1.S1_at	DN489006	hypothetical protein	-	6e-14	At1g76310	CYCB2	O.I.	H.G.	S.X.	Please selecteFP Browser (expression)
0.52	79.4	0.94	Ptp.6857.2.S1_s_at	CA923790	hypothetical protein	-	1e-1	At4g35620	CYCB2	O.I.	H.G.	S.X.	Please selecteFP Browser (expression)

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
9.4	98.8	GSM327661	Populus balsamifera_Male_Catkin_midday_3	GSE13990	Populus balsamifera developmental tissue series
5.9	97.4	GSM327660	Populus balsamifera_Male_Catkin_midday_2	GSE13990	Populus balsamifera developmental tissue series
4.8	96.4	GSM327659	Populus balsamifera_Male_Catkin_midday_1	GSE13990	Populus balsamifera developmental tissue series
4.4	95.9	GSM327656	Populus balsamifera_Female_Catkin_midday_1	GSE13990	Populus balsamifera developmental tissue series
4.3	95.8	GSM334224	Populus balsamifera_1006_mature_leaf_midday_1	GSE13990	Populus balsamifera developmental tissue series
3.4	94.0	GSM327404	Populus balsamifera_1006_young_leaf_midday_1	GSE13990	Populus balsamifera developmental tissue series
3.3	93.7	GSM327658	Populus balsamifera_Female_Catkin_midday_3	GSE13990	Populus balsamifera developmental tissue series
3.1	93.2	GSM327405	Populus balsamifera_1006_young_leaf_midday_2	GSE13990	Populus balsamifera developmental tissue series
2.7	91.8	GSM327657	Populus balsamifera_Female_Catkin_midday_2	GSE13990	Populus balsamifera developmental tissue series
2.2	89.3	GSM327406	Populus balsamifera_1006_young_leaf_midday_3	GSE13990	Populus balsamifera developmental tissue series

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Hordeum_vulgare

Oryza_sativa

Triticum_aestivum

Vitis_vinifera

Zea_mays

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