Co-expression analysis

Gene ID PtpAffx.202202.1.S1_x_at
Gene name hypothetical protein
Homology with ArabidopsisSimilar to At5g44920: Toll-Interleukin-Resistance (TIR) domain-containing protein (HF=1e+0)
Module size 8 genes
NF 0.22
%ile 40.4

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.6791.10.88PtpAffx.202202.1.S1_x_atpmrna4400hypothetical protein-1e+0At5g44920Toll-Interleukin-Resistance (TIR) domain-containing proteinO.I.H.G.S.X.
0.5582.20.95Ptp.4036.1.S1_atCV282873hypothetical protein-4e-8At2g41430ERD15 (EARLY RESPONSIVE TO DEHYDRATION 15)O.I.H.G.S.X.
0.4067.00.95Ptp.3180.1.S1_x_atCV256657hypothetical protein-3e-15At1g35720ANNAT1 (ANNEXIN ARABIDOPSIS 1)O.I.H.G.S.X.
0.4067.00.95Ptp.7652.1.S1_s_atCV270972hypothetical protein-7e-80At5g01960zinc finger (C3HC4-type RING finger) family proteinO.I.H.G.S.X.
0.2645.20.91PtpAffx.92678.3.S1_atCV245734hypothetical protein-1e-6At1g76140serine-type endopeptidase/ serine-type peptidaseO.I.H.G.S.X.
0.2238.30.94PtpAffx.88343.1.S1_atCV271081--1e-11At5g06370NC domain-containing proteinO.I.H.G.S.X.
0.1118.10.91PtpAffx.88497.2.A1_a_atBU879234hypothetical protein-7e-2At5g45940atnudt11 (Arabidopsis thaliana Nudix hydrolase homolog 11)O.I.H.G.S.X.
0.0812.90.91PtpAffx.9921.1.A1_a_atCV242822histone ubiquitination proteins group-6e-85At1g14400UBC1 (UBIQUITIN CARRIER PROTEIN 1)O.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
6.597.8GSM328562Populus x canescens root hypoxia_rep_04GSE13109Effect of hypoxia on gene expression in Grey poplarLink to GEO
5.497.0GSM328532Populus x canescens root hypoxia_rep_02GSE13109Effect of hypoxia on gene expression in Grey poplarLink to GEO
5.396.9GSM328533Populus x canescens root hypoxia_rep_03GSE13109Effect of hypoxia on gene expression in Grey poplarLink to GEO
4.696.2GSM328484Populus x canescens root hypoxia_rep_01GSE13109Effect of hypoxia on gene expression in Grey poplarLink to GEO
4.596.1GSM328567Populus x canescens root hypoxia_rep_09GSE13109Effect of hypoxia on gene expression in Grey poplarLink to GEO
4.495.9GSM328564Populus x canescens root hypoxia_rep_06GSE13109Effect of hypoxia on gene expression in Grey poplarLink to GEO
4.395.8GSM328565Populus x canescens root hypoxia_rep_07GSE13109Effect of hypoxia on gene expression in Grey poplarLink to GEO
3.092.9GSM327659Populus balsamifera_Male_Catkin_midday_1GSE13990Populus balsamifera developmental tissue seriesLink to GEO
2.791.8GSM327661Populus balsamifera_Male_Catkin_midday_3GSE13990Populus balsamifera developmental tissue seriesLink to GEO
2.691.3GSM327658Populus balsamifera_Female_Catkin_midday_3GSE13990Populus balsamifera developmental tissue seriesLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Triticum_aestivum
Vitis_vinifera
Zea_mays



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