Co-expression analysis

Gene ID PtpAffx.201858.1.S1_at
Gene name hypothetical protein
Homology with ArabidopsisSimilar to At1g21730: kinesin-related protein (MKRP1) (HF=6e-104)
Module size 19 genes
NF 0.34
%ile 59.1

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.9097.90.93PtpAffx.201858.1.S1_atpmrna3688hypothetical protein-6e-104At1g21730kinesin-related protein (MKRP1)O.I.H.G.S.X.
0.4875.40.96PtpAffx.119684.1.S1_atAI164927hypothetical protein-2e-10At4g02440EID1 (EMPFINDLICHER IM DUNKELROTEN LICHT 1)O.I.H.G.S.X.
0.4875.40.95PtpAffx.94574.1.A1_a_atCV281840hypothetical protein-2e-3At2g29640JOSL (JOSEPHIN-LIKE PROTEIN)O.I.H.G.S.X.
0.4572.30.93PtpAffx.213706.1.S1_atpmrna26750hypothetical protein-2e-2At5g01780oxidoreductaseO.I.H.G.S.X.
0.4572.30.95PtpAffx.223383.1.S1_s_atpmrna41360hypothetical protein-2e-7At5g16520unknown proteinO.I.H.G.S.X.
0.4369.70.95PtpAffx.5244.1.S1_atCV256118hypothetical protein-4e-98At4g21800QQT2 (quatre-quart2)O.I.H.G.S.X.
0.4167.70.95PtpAffx.206220.1.S1_atpmrna12348hypothetical protein-1e-3At3g15260protein phosphatase 2C, putative / PP2C, putativeO.I.H.G.S.X.
0.4067.00.96PtpAffx.139478.1.S1_atCV131867hypothetical protein-5e+0At4g33640unknown proteinO.I.H.G.S.X.
0.3863.70.96Ptp.5537.1.S1_atCK087818hypothetical protein-2e+0At3g53670unknown proteinO.I.H.G.S.X.
0.3661.60.96Ptp.7444.1.S1_s_atBU834918hypothetical protein-7e-43At1g10210ATMPK1 (MITOGEN-ACTIVATED PROTEIN KINASE 1)O.I.H.G.S.X.
0.3357.50.95PtpAffx.202144.1.S1_atpmrna4286hypothetical protein-5e-5At3g60680unknown proteinO.I.H.G.S.X.
0.2645.20.95PtpAffx.200231.1.S1_atpmrna440hypothetical protein-3e-7At5g37380DNAJ heat shock N-terminal domain-containing proteinO.I.H.G.S.X.
0.2645.20.96PtpAffx.207844.1.S1_atpmrna15577hypothetical protein-3e-18At1g16280DEAD/DEAH box helicase, putativeO.I.H.G.S.X.
0.2238.30.95PtpAffx.212106.1.S1_atpmrna23742calcium dependent protein kinase 12-5e-33At5g23580CDPK9 (CALMODULIN-LIKE DOMAIN PROTEIN KINASE 9)O.I.H.G.S.X.
0.2238.30.95PtpAffx.5584.1.S1_atCV267296hypothetical protein-2e-38At2g259103'-5' exonuclease domain-containing protein / K homology domain-containing protein / KH domain-containing proteinO.I.H.G.S.X.
0.2136.50.96PtpAffx.213901.1.S1_s_atpmrna27103hypothetical protein-1e-56At1g61010CPSF73-I (CLEAVAGE AND POLYADENYLATION SPECIFICITY FACTOR 73-I)O.I.H.G.S.X.
0.1932.70.96PtpAffx.207924.1.S1_atpmrna15727hypothetical protein-2e-165At5g49930emb1441 (embryo defective 1441)O.I.H.G.S.X.
0.1932.70.96PtpAffx.111902.1.S1_atCK101628hypothetical protein-2e-2At2g29140APUM3 (Arabidopsis Pumilio 3)O.I.H.G.S.X.
0.1423.50.96PtpAffx.17912.1.A1_s_atDN487070hypothetical protein-9e-59At1g72340eukaryotic translation initiation factor 2B family protein / eIF-2B family proteinO.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
4.295.6GSM327661Populus balsamifera_Male_Catkin_midday_3GSE13990Populus balsamifera developmental tissue seriesLink to GEO
3.794.7GSM327404Populus balsamifera_1006_young_leaf_midday_1GSE13990Populus balsamifera developmental tissue seriesLink to GEO
2.691.3GSM327660Populus balsamifera_Male_Catkin_midday_2GSE13990Populus balsamifera developmental tissue seriesLink to GEO
2.490.4GSM327656Populus balsamifera_Female_Catkin_midday_1GSE13990Populus balsamifera developmental tissue seriesLink to GEO
2.289.3GSM327411Populus balsamifera_1006_differentiating_xylem_midday_1GSE13990Populus balsamifera developmental tissue seriesLink to GEO
1.785.5GSM327658Populus balsamifera_Female_Catkin_midday_3GSE13990Populus balsamifera developmental tissue seriesLink to GEO
1.684.5GSM327412Populus balsamifera_1006_differentiating_xylem_midday_2GSE13990Populus balsamifera developmental tissue seriesLink to GEO
1.684.5GSM372092Clone3200_LPI2_N-_4w_rep2GSE14893Comparative transcriptomics analysis of Populus leaves under nitrogen limitation: clone 3200Link to GEO
1.684.5GSM327413Populus balsamifera_1006_differentiating_xylem_midday_3GSE13990Populus balsamifera developmental tissue seriesLink to GEO
1.583.5GSM327659Populus balsamifera_Male_Catkin_midday_1GSE13990Populus balsamifera developmental tissue seriesLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Triticum_aestivum
Vitis_vinifera
Zea_mays



Back to the CoP portal site

Back to the KAGIANA project homepage