Co-expression analysis

Gene ID	PtpAffx.201730.1.S1_at
Gene name	silencing group B protein
Homology with Arabidopsis	Similar to At1g03150: GCN5-related N-acetyltransferase (GNAT) family protein (HF=3e-57)
Module size	6 genes
NF	0.10
%ile	20.3

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.43	69.7	0.84	PtpAffx.201730.1.S1_at	pmrna3438	silencing group B protein	-	3e-57	At1g03150	GCN5-related N-acetyltransferase (GNAT) family protein	O.I.	H.G.	S.X.	Please selecteFP Browser (expression)
0.36	61.6	0.85	PtpAffx.213279.1.S1_at	pmrna25971	hypothetical protein	-	7e+0	At5g47100	CBL9	O.I.	H.G.	S.X.	Please selecteFP Browser (expression)
0.17	29.1	0.85	PtpAffx.153765.1.A1_at	CV243818	-	-	1e+0	At2g47920	kinase interacting family protein	O.I.	H.G.	S.X.	Please selecteFP Browser (expression)
0.14	23.5	0.84	PtpAffx.39546.1.A1_at	CK087891	hypothetical protein	-	7e+0	At5g44495	-	O.I.	H.G.	S.X.	Please selecteFP Browser (expression)
0.09	14.6	0.84	PtpAffx.134139.1.A1_at	CV247008	-	-	3e-1	At5g43080	CYCA3	O.I.	H.G.	S.X.	Please selecteFP Browser (expression)
0.04	6.9	0.85	PtpAffx.219732.1.S1_at	pmrna35751	hypothetical protein	-	2e-1	At5g44720	molybdenum cofactor sulfurase family protein	O.I.	H.G.	S.X.	Please selecteFP Browser (expression)

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
7.5	98.3	GSM327404	Populus balsamifera_1006_young_leaf_midday_1	GSE13990	Populus balsamifera developmental tissue series
3.5	94.3	GSM327412	Populus balsamifera_1006_differentiating_xylem_midday_2	GSE13990	Populus balsamifera developmental tissue series
3.2	93.5	GSM327413	Populus balsamifera_1006_differentiating_xylem_midday_3	GSE13990	Populus balsamifera developmental tissue series
2.9	92.5	GSM327411	Populus balsamifera_1006_differentiating_xylem_midday_1	GSE13990	Populus balsamifera developmental tissue series
2.3	89.8	GSM327358	Populus balsamifera_20071015_Seedling_continuous_light_6d_2	GSE13990	Populus balsamifera developmental tissue series
2.2	89.3	GSM327408	Populus balsamifera_1006_root_midday_2	GSE13990	Populus balsamifera developmental tissue series
2.2	89.3	GSM327407	Populus balsamifera_1006_root_midday_1	GSE13990	Populus balsamifera developmental tissue series
1.7	85.5	GSM327406	Populus balsamifera_1006_young_leaf_midday_3	GSE13990	Populus balsamifera developmental tissue series
1.6	84.5	GSM328565	Populus x canescens root hypoxia_rep_07	GSE13109	Effect of hypoxia on gene expression in Grey poplar
1.6	84.5	GSM327405	Populus balsamifera_1006_young_leaf_midday_2	GSE13990	Populus balsamifera developmental tissue series

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Hordeum_vulgare

Oryza_sativa

Triticum_aestivum

Vitis_vinifera

Zea_mays

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