Co-expression analysis

Gene ID PtpAffx.201602.1.S1_at
Gene name hypothetical protein
Homology with ArabidopsisSimilar to At4g38660: thaumatin, putative (HF=2e-5)
Module size 14 genes
NF 0.74
%ile 97.6

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.5984.90.92PtpAffx.201602.1.S1_atpmrna3149hypothetical protein-2e-5At4g38660thaumatin, putativeO.I.H.G.S.X.
0.8997.80.95PtpAffx.102386.1.A1_atCV229138--1e+0At4g21216unknown proteinO.I.H.G.S.X.
0.8997.80.96PtpAffx.29241.1.A1_atBP936699glycosyltransferase, CAZy family GT8-3e-13At5g54690GAUT12 (GALACTURONOSYLTRANSFERASE 12)O.I.H.G.S.X.
0.8697.40.95Ptp.4.1.A1_a_atCV238596hypothetical protein-5e-28At5g15630IRX6O.I.H.G.S.X.
0.8597.20.97Ptp.2007.1.S1_s_atCF236359hypothetical protein-3e-2At5g23750remorin family proteinO.I.H.G.S.X.
0.8497.10.94PtpAffx.1704.5.A1_atCV248047--1e-174At5g62690TUB2O.I.H.G.S.X.
0.8397.00.94PtpAffx.12420.1.A1_atCV236172hypothetical protein-4e-1At3g01970WRKY45O.I.H.G.S.X.
0.8397.00.95PtpAffx.49655.1.A1_atDN496344hypothetical protein-6e+0At4g24290-O.I.H.G.S.X.
0.8196.10.96Ptp.1780.1.S1_atAY935506.1hypothetical protein-2e-143At1g27440GUT2O.I.H.G.S.X.
0.7995.30.95PtpAffx.25139.1.A1_s_atCV225336hypothetical protein-1e-10At5g03170FLA11O.I.H.G.S.X.
0.7995.30.96PtpAffx.200222.1.S1_atpmrna418hypothetical protein-1e-18At1g27920MAP65-8 (MICROTUBULE-ASSOCIATED PROTEIN 65-8)O.I.H.G.S.X.
0.6086.00.96PtpAffx.203942.1.S1_atpmrna7779hypothetical protein-2e-2At3g51290proline-rich family proteinO.I.H.G.S.X.
0.5480.80.95Ptp.2510.2.S1_atCV273621--2e-1At2g41040methyltransferase-relatedO.I.H.G.S.X.
0.4167.70.94PtpAffx.26747.1.A1_atCV229104hypothetical protein-4e-1At5g55950transporter-relatedO.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
9.098.7GSM327411Populus balsamifera_1006_differentiating_xylem_midday_1GSE13990Populus balsamifera developmental tissue seriesLink to GEO
5.196.8GSM327413Populus balsamifera_1006_differentiating_xylem_midday_3GSE13990Populus balsamifera developmental tissue seriesLink to GEO
4.495.9GSM327412Populus balsamifera_1006_differentiating_xylem_midday_2GSE13990Populus balsamifera developmental tissue seriesLink to GEO
2.691.3GSM362888Clone1979_LPI5_N+_4w_rep2GSE14515Comparative transcriptomics analysis of Populus leaves under nitrogen limitation: clone 1979Link to GEO
2.590.9GSM327659Populus balsamifera_Male_Catkin_midday_1GSE13990Populus balsamifera developmental tissue seriesLink to GEO
2.289.3GSM327656Populus balsamifera_Female_Catkin_midday_1GSE13990Populus balsamifera developmental tissue seriesLink to GEO
1.684.5GSM327661Populus balsamifera_Male_Catkin_midday_3GSE13990Populus balsamifera developmental tissue seriesLink to GEO
1.684.5GSM328484Populus x canescens root hypoxia_rep_01GSE13109Effect of hypoxia on gene expression in Grey poplarLink to GEO
1.583.5GSM244437Mmd infected tissue, biological rep2GSE9673Comparative transcriptomic reveals signatures specific to various interactions with Melampsora rust fungiLink to GEO
1.482.3GSM328565Populus x canescens root hypoxia_rep_07GSE13109Effect of hypoxia on gene expression in Grey poplarLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Triticum_aestivum
Vitis_vinifera
Zea_mays



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