Co-expression analysis

Gene ID PtpAffx.201245.1.S1_at
Gene name hypothetical protein
Homology with ArabidopsisSimilar to At2g23670: YCF37 (Arabidopsis homolog of Synechocystis YCF37) (HF=4e+0)
Module size 10 genes
NF 0.44
%ile 73.7

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.6488.40.91PtpAffx.201245.1.S1_atpmrna2472hypothetical protein-4e+0At2g23670YCF37 (Arabidopsis homolog of Synechocystis YCF37)O.I.H.G.S.X.
0.7493.80.94PtpAffx.155308.1.S1_atCN522196--8e-2At4g35987unknown proteinO.I.H.G.S.X.
0.5784.20.95PtpAffx.15237.5.S1_a_atCN523696hypothetical protein-6e-62At3g13470chaperonin, putativeO.I.H.G.S.X.
0.4774.60.94PtpAffx.112420.1.S1_atCN520981hypothetical protein-5e-62At2g28000CPN60A (CHAPERONIN-60ALPHA)O.I.H.G.S.X.
0.4673.70.95PtpAffx.1147.2.A1_atCV131300hypothetical protein-3e-17At5g55280FTSZ1-1O.I.H.G.S.X.
0.4572.30.91PtpAffx.151978.1.S1_atCF236286--1e-3At5g33320CUE1 (CAB UNDEREXPRESSED 1)O.I.H.G.S.X.
0.3661.60.93Ptp.6287.1.S1_atCN517517hypothetical protein-2e-80At3g46740TOC75-III (TRANSLOCON AT THE OUTER ENVELOPE MEMBRANE OF CHLOROPLASTS 75-III)O.I.H.G.S.X.
0.3357.50.97PtpAffx.15237.3.S1_atDN484013hypothetical protein-9e-74At5g56500ATP binding / protein bindingO.I.H.G.S.X.
0.2747.10.94PtpAffx.23321.1.S1_atCV260320--6e-23At4g00026-O.I.H.G.S.X.
0.2441.80.92PtpAffx.8910.1.S1_a_atBU815185hypothetical protein-2e-11At1g69485structural constituent of ribosomeO.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
2.992.5GSM372089Clone3200_LPI2_N+_4w_rep1GSE14893Comparative transcriptomics analysis of Populus leaves under nitrogen limitation: clone 3200Link to GEO
2.791.8GSM372091Clone3200_LPI2_N-_4w_rep1GSE14893Comparative transcriptomics analysis of Populus leaves under nitrogen limitation: clone 3200Link to GEO
2.590.9GSM327405Populus balsamifera_1006_young_leaf_midday_2GSE13990Populus balsamifera developmental tissue seriesLink to GEO
2.389.8GSM327661Populus balsamifera_Male_Catkin_midday_3GSE13990Populus balsamifera developmental tissue seriesLink to GEO
2.389.8GSM328062Populus x canescens leaf control_rep_02GSE13109Effect of hypoxia on gene expression in Grey poplarLink to GEO
2.088.0GSM362884Clone1979_LPI2_N+_4w_rep2GSE14515Comparative transcriptomics analysis of Populus leaves under nitrogen limitation: clone 1979Link to GEO
1.987.2GSM327404Populus balsamifera_1006_young_leaf_midday_1GSE13990Populus balsamifera developmental tissue seriesLink to GEO
1.987.2GSM334224Populus balsamifera_1006_mature_leaf_midday_1GSE13990Populus balsamifera developmental tissue seriesLink to GEO
1.886.4GSM372092Clone3200_LPI2_N-_4w_rep2GSE14893Comparative transcriptomics analysis of Populus leaves under nitrogen limitation: clone 3200Link to GEO
1.886.4GSM327406Populus balsamifera_1006_young_leaf_midday_3GSE13990Populus balsamifera developmental tissue seriesLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Triticum_aestivum
Vitis_vinifera
Zea_mays



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