Co-expression analysis

Gene ID PtpAffx.200879.1.S1_at
Gene name hypothetical protein
Homology with ArabidopsisSimilar to At2g26760: CYCB1 (HF=2e-6)
Module size 6 genes
NF 0.60
%ile 90.2

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.9199.20.95PtpAffx.200879.1.S1_atpmrna1723hypothetical protein-2e-6At2g26760CYCB1O.I.H.G.S.X.
0.6388.10.95Ptp.759.1.S1_atCV259673tubulin alpha-7 chain-1e-82At4g14960TUA6O.I.H.G.S.X.
0.5582.20.95Ptp.5638.1.S1_atDN489006hypothetical protein-6e-14At1g76310CYCB2O.I.H.G.S.X.
0.5078.60.94PtpAffx.20278.2.A1_s_atCV244932hypothetical protein-3e-20At4g28950ROP9 (RHO-RELATED PROTEIN FROM PLANTS 9)O.I.H.G.S.X.
0.4673.70.95PtpAffx.128825.2.S1_a_atCK096703hypothetical protein-4e-7At5g67270ATEB1C (microtubule end binding protein 1)O.I.H.G.S.X.
0.4673.70.94Ptp.6857.2.S1_s_atCA923790hypothetical protein-1e-1At4g35620CYCB2O.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
6.397.7GSM327660Populus balsamifera_Male_Catkin_midday_2GSE13990Populus balsamifera developmental tissue seriesLink to GEO
5.797.3GSM327661Populus balsamifera_Male_Catkin_midday_3GSE13990Populus balsamifera developmental tissue seriesLink to GEO
3.995.1GSM327405Populus balsamifera_1006_young_leaf_midday_2GSE13990Populus balsamifera developmental tissue seriesLink to GEO
3.894.9GSM327404Populus balsamifera_1006_young_leaf_midday_1GSE13990Populus balsamifera developmental tissue seriesLink to GEO
2.892.1GSM327406Populus balsamifera_1006_young_leaf_midday_3GSE13990Populus balsamifera developmental tissue seriesLink to GEO
2.590.9GSM327656Populus balsamifera_Female_Catkin_midday_1GSE13990Populus balsamifera developmental tissue seriesLink to GEO
2.289.3GSM327659Populus balsamifera_Male_Catkin_midday_1GSE13990Populus balsamifera developmental tissue seriesLink to GEO
2.188.6GSM372089Clone3200_LPI2_N+_4w_rep1GSE14893Comparative transcriptomics analysis of Populus leaves under nitrogen limitation: clone 3200Link to GEO
1.886.4GSM327657Populus balsamifera_Female_Catkin_midday_2GSE13990Populus balsamifera developmental tissue seriesLink to GEO
1.785.5GSM372096Clone3200_LPI5_N-_4w_rep2GSE14893Comparative transcriptomics analysis of Populus leaves under nitrogen limitation: clone 3200Link to GEO

Inter-species module comparison

A co-expression module including the maize gene, Zm.4288.1.A1_at, orthologous to the query gene, PtpAffx.200879.1.S1_at

VF%ileGene IDRepr. IDGene NameFunc.EvAGI codeArabidopsis gene nameO.I.H.G.S.X.Other DB
0.6481.7Zm.4288.1.A1_atAt2g26760cyclin IaZm-4e-3At2g26760CYCB1O.I.H.G.S.X.
0.4658.4Zm.7611.2.A1_atAt2g26760--2e-3At1g49400emb1129 (embryo defective 1129)O.I.H.G.S.X.
0.4251.3Zm.10827.1.S1_atAt2g26760--8e-2At1g65730YSL7 (YELLOW STRIPE LIKE 7)O.I.H.G.S.X.
0.3538.9Zm.15852.2.A1_atAt2g26760--1e-41At5g03430phosphoadenosine phosphosulfate (PAPS) reductase family proteinO.I.H.G.S.X.
0.3233.4Zm.3999.1.S1_atAt2g26760hypothetical protein LOC100276811-3e+0At5g39860PRE1 (PACLOBUTRAZOL RESISTANCE1)O.I.H.G.S.X.
0.3131.6Zm.18485.1.S1_atAt2g26760DNA binding protein-4e-8At1g71260ATWHY2 (A. THALIANA WHIRLY 2)O.I.H.G.S.X.
0.2115.5Zm.6822.2.A1_atAt2g26760--3e-2At5g42560abscisic acid-responsive HVA22 family proteinO.I.H.G.S.X.
0.1710.6Zm.1980.1.A1_atAt2g26760hypothetical protein LOC100193990-2e+0At4g14410basic helix-loop-helix (bHLH) family proteinO.I.H.G.S.X.
0.1710.6Zm.1129.1.A1_atAt2g26760--1e+0At1g80730ZFP1 (ZINC-FINGER PROTEIN 1)O.I.H.G.S.X.

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Triticum_aestivum
Vitis_vinifera



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