Co-expression analysis

Gene ID PtpAffx.200852.1.S1_at
Gene name hypothetical protein
Homology with ArabidopsisSimilar to At1g30370: lipase class 3 family protein (HF=2e-3)
Module size 6 genes
NF 0.70
%ile 96.3

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.5078.60.94PtpAffx.200852.1.S1_atpmrna1653hypothetical protein-2e-3At1g30370lipase class 3 family proteinO.I.H.G.S.X.
0.8096.00.94PtpAffx.86948.1.S1_s_atDN483659hypothetical protein-7e-2At3g05980unknown proteinO.I.H.G.S.X.
0.7192.60.92PtpAffx.86948.1.S1_atDN483659--7e-2At3g05980unknown proteinO.I.H.G.S.X.
0.6791.10.94PtpAffx.69940.1.A1_atCV238070--7e+0At5g11080ubiquitin family proteinO.I.H.G.S.X.
0.6791.10.94PtpAffx.142992.1.S1_s_atCA823082glycosyltransferase, CAZy family GT8-3e-4At1g70090LGT8 (GLUCOSYL TRANSFERASE FAMILY 8)O.I.H.G.S.X.
0.5582.20.95PtpAffx.85220.1.S1_atDN488269hypothetical protein-7e+0Atmg00120-O.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
11.499.2GSM328483Populus x canescens root control_rep_06GSE13109Effect of hypoxia on gene expression in Grey poplarLink to GEO
4.495.9GSM328566Populus x canescens root hypoxia_rep_08GSE13109Effect of hypoxia on gene expression in Grey poplarLink to GEO
3.694.5GSM328105Populus x canescens leaf hypoxia_rep_01GSE13109Effect of hypoxia on gene expression in Grey poplarLink to GEO
3.594.3GSM328564Populus x canescens root hypoxia_rep_06GSE13109Effect of hypoxia on gene expression in Grey poplarLink to GEO
3.092.9GSM328565Populus x canescens root hypoxia_rep_07GSE13109Effect of hypoxia on gene expression in Grey poplarLink to GEO
2.992.5GSM328567Populus x canescens root hypoxia_rep_09GSE13109Effect of hypoxia on gene expression in Grey poplarLink to GEO
2.691.3GSM327661Populus balsamifera_Male_Catkin_midday_3GSE13990Populus balsamifera developmental tissue seriesLink to GEO
2.389.8GSM327656Populus balsamifera_Female_Catkin_midday_1GSE13990Populus balsamifera developmental tissue seriesLink to GEO
2.289.3GSM328562Populus x canescens root hypoxia_rep_04GSE13109Effect of hypoxia on gene expression in Grey poplarLink to GEO
2.188.6GSM328533Populus x canescens root hypoxia_rep_03GSE13109Effect of hypoxia on gene expression in Grey poplarLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Triticum_aestivum
Vitis_vinifera
Zea_mays



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