Co-expression analysis

Gene ID PtpAffx.200614.1.S1_at
Gene name hypothetical protein
Homology with ArabidopsisSimilar to At5g22410: peroxidase, putative (HF=5e-1)
Module size 6 genes
NF 0.01
%ile 0.6

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.9199.20.76PtpAffx.200614.1.S1_atpmrna1203hypothetical protein-5e-1At5g22410peroxidase, putativeO.I.H.G.S.X.
0.035.20.79PtpAffx.221155.1.S1_atpmrna37797hypothetical protein-2e-1At3g48208-O.I.H.G.S.X.
0.012.20.83PtpAffx.159878.1.A1_atCV256589hypothetical protein-2e-26At3g4503040S ribosomal protein S20 (RPS20A)O.I.H.G.S.X.
0.012.20.83PtpAffx.142480.1.A1_atCK095424--8e+0Atcg00330-O.I.H.G.S.X.
-0.40.83PtpAffx.219472.1.S1_atpmrna35401--2e-1At5g06250transcription factorO.I.H.G.S.X.
-0.40.85PtpAffx.220310.1.S1_x_atpmrna36680hypothetical protein-4e-1At4g29850unknown proteinO.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
4.996.5GSM328558Populus x canescens root control_rep_09GSE13109Effect of hypoxia on gene expression in Grey poplarLink to GEO
2.691.3GSM328557Populus x canescens root control_rep_08GSE13109Effect of hypoxia on gene expression in Grey poplarLink to GEO
2.590.9GSM328559Populus x canescens root control_rep_10GSE13109Effect of hypoxia on gene expression in Grey poplarLink to GEO
2.590.9GSM328292Populus x canescens root control_rep_05GSE13109Effect of hypoxia on gene expression in Grey poplarLink to GEO
2.490.4GSM328284Populus x canescens root control_rep_03GSE13109Effect of hypoxia on gene expression in Grey poplarLink to GEO
2.289.3GSM328277Populus x canescens root control_rep_01GSE13109Effect of hypoxia on gene expression in Grey poplarLink to GEO
2.289.3GSM328560Populus x canescens root control_rep_11GSE13109Effect of hypoxia on gene expression in Grey poplarLink to GEO
2.289.3GSM328534Populus x canescens root control_rep_07GSE13109Effect of hypoxia on gene expression in Grey poplarLink to GEO
1.886.4GSM328483Populus x canescens root control_rep_06GSE13109Effect of hypoxia on gene expression in Grey poplarLink to GEO
1.886.4GSM328563Populus x canescens root hypoxia_rep_05GSE13109Effect of hypoxia on gene expression in Grey poplarLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Triticum_aestivum
Vitis_vinifera
Zea_mays



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