Co-expression analysis

Gene ID PtpAffx.200341.1.S1_at
Gene name hypothetical protein
Homology with ArabidopsisSimilar to At4g10750: HpcH/HpaI aldolase family protein (HF=3e-23)
Module size 14 genes
NF 0.17
%ile 32.6

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.9699.80.88PtpAffx.200341.1.S1_atpmrna675hypothetical protein-3e-23At4g10750HpcH/HpaI aldolase family proteinO.I.H.G.S.X.
0.4167.70.89PtpAffx.1287.1.A1_s_atCV233886hypothetical protein-1e-7At1g79620leucine-rich repeat transmembrane protein kinase, putativeO.I.H.G.S.X.
0.3255.20.93PtpAffx.144410.1.S1_atCK103649hypothetical protein-1e-18At1g20760calcium-binding EF hand family proteinO.I.H.G.S.X.
0.2950.50.95PtpAffx.222280.1.S1_s_atpmrna39594hypothetical protein-2e-5At2g43410FPAO.I.H.G.S.X.
0.2340.50.95PtpAffx.200412.1.S1_atpmrna830hypothetical protein-0At4g11380beta-adaptin, putativeO.I.H.G.S.X.
0.2340.50.97Ptp.6486.1.S1_s_atCV249938actin 1-0At1g49240ACT8 (ACTIN 8)O.I.H.G.S.X.
0.2136.50.94PtpAffx.201499.1.S1_s_atpmrna2950hypothetical protein-2e+0At5g52980unknown proteinO.I.H.G.S.X.
0.1729.10.93PtpAffx.205161.1.S1_atpmrna10214hypothetical protein-2e-16At5g10370helicase domain-containing protein / IBR domain-containing protein / zinc finger protein-relatedO.I.H.G.S.X.
0.1525.30.96PtpAffx.1258.1.S1_s_atCV242350actin 1-5e-138At5g09810ACT7 (ACTIN 7)O.I.H.G.S.X.
0.1525.30.95PtpAffx.217318.1.S1_atpmrna32530f-box family protein-1e-119At5g15710F-box family proteinO.I.H.G.S.X.
0.1016.30.96PtpAffx.73338.3.S1_s_atCV262876hypothetical protein-9e-30At2g30110ATUBA1O.I.H.G.S.X.
0.0711.60.93PtpAffx.206830.1.S1_atpmrna13559hypothetical protein-4e-10At5g54830DOMON domain-containing protein / dopamine beta-monooxygenase N-terminal domain-containing proteinO.I.H.G.S.X.
0.0711.60.94PtpAffx.213349.1.S1_s_atpmrna26118hypothetical protein-5e-50At3g58050unknown proteinO.I.H.G.S.X.
0.035.20.94Ptp.7074.1.S1_atDN488125hypothetical protein-5e-1At1g69800CBS domain-containing proteinO.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
5.497.0GSM328565Populus x canescens root hypoxia_rep_07GSE13109Effect of hypoxia on gene expression in Grey poplarLink to GEO
4.095.3GSM362889Clone1979_LPI5_N-_4w_rep1GSE14515Comparative transcriptomics analysis of Populus leaves under nitrogen limitation: clone 1979Link to GEO
3.193.2GSM327661Populus balsamifera_Male_Catkin_midday_3GSE13990Populus balsamifera developmental tissue seriesLink to GEO
2.490.4GSM328564Populus x canescens root hypoxia_rep_06GSE13109Effect of hypoxia on gene expression in Grey poplarLink to GEO
2.389.8GSM327656Populus balsamifera_Female_Catkin_midday_1GSE13990Populus balsamifera developmental tissue seriesLink to GEO
2.088.0GSM328567Populus x canescens root hypoxia_rep_09GSE13109Effect of hypoxia on gene expression in Grey poplarLink to GEO
1.785.5GSM327657Populus balsamifera_Female_Catkin_midday_2GSE13990Populus balsamifera developmental tissue seriesLink to GEO
1.785.5GSM327408Populus balsamifera_1006_root_midday_2GSE13990Populus balsamifera developmental tissue seriesLink to GEO
1.785.5GSM327411Populus balsamifera_1006_differentiating_xylem_midday_1GSE13990Populus balsamifera developmental tissue seriesLink to GEO
1.583.5GSM327658Populus balsamifera_Female_Catkin_midday_3GSE13990Populus balsamifera developmental tissue seriesLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Triticum_aestivum
Vitis_vinifera
Zea_mays



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