Co-expression analysis

Gene ID PtpAffx.200244.1.S1_at
Gene name hypothetical protein
Homology with ArabidopsisSimilar to At5g13150: ATEXO70C1 (exocyst subunit EXO70 family protein C1) (HF=3e-13)
Module size 6 genes
NF 0.55
%ile 85.4

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.9199.21.00PtpAffx.200244.1.S1_atpmrna472hypothetical protein-3e-13At5g13150ATEXO70C1 (exocyst subunit EXO70 family protein C1)O.I.H.G.S.X.
0.7192.61.00PtpAffx.204952.1.S1_atpmrna9797hypothetical protein-6e-13At3g46750unknown proteinO.I.H.G.S.X.
0.6791.11.00PtpAffx.206298.1.S1_atpmrna12485hypothetical protein-2e-17At3g54100unknown proteinO.I.H.G.S.X.
0.6187.01.00PtpAffx.202004.1.S1_atpmrna3997hypothetical protein-7e-15At3g49720unknown proteinO.I.H.G.S.X.
0.5984.91.00PtpAffx.204028.1.S1_atpmrna7945hypothetical protein-6e-60At1g65960GAD2 (GLUTAMATE DECARBOXYLASE 2)O.I.H.G.S.X.
0.2238.31.00PtpAffx.214487.1.S1_atpmrna28174autoinhibited H+ ATPase-3e-128At3g42640AHA8 (Arabidopsis H(+)-ATPase 8)O.I.H.G.S.X.

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Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
7.798.3GSM327660Populus balsamifera_Male_Catkin_midday_2GSE13990Populus balsamifera developmental tissue seriesLink to GEO
6.297.6GSM327658Populus balsamifera_Female_Catkin_midday_3GSE13990Populus balsamifera developmental tissue seriesLink to GEO
5.196.8GSM327659Populus balsamifera_Male_Catkin_midday_1GSE13990Populus balsamifera developmental tissue seriesLink to GEO
4.996.5GSM327657Populus balsamifera_Female_Catkin_midday_2GSE13990Populus balsamifera developmental tissue seriesLink to GEO
4.295.6GSM327656Populus balsamifera_Female_Catkin_midday_1GSE13990Populus balsamifera developmental tissue seriesLink to GEO
3.694.5GSM328559Populus x canescens root control_rep_10GSE13109Effect of hypoxia on gene expression in Grey poplarLink to GEO
3.092.9GSM327661Populus balsamifera_Male_Catkin_midday_3GSE13990Populus balsamifera developmental tissue seriesLink to GEO
2.892.1GSM328284Populus x canescens root control_rep_03GSE13109Effect of hypoxia on gene expression in Grey poplarLink to GEO
2.590.9GSM328277Populus x canescens root control_rep_01GSE13109Effect of hypoxia on gene expression in Grey poplarLink to GEO
2.389.8GSM328534Populus x canescens root control_rep_07GSE13109Effect of hypoxia on gene expression in Grey poplarLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Triticum_aestivum
Vitis_vinifera
Zea_mays



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