Co-expression analysis

Gene ID	PtpAffx.200110.1.S1_at
Gene name	glycosyl transferase family 37
Homology with Arabidopsis	Similar to At2g03210: FUT2 (FUCOSYLTRANSFERASE 2) (HF=3e-15)
Module size	6 genes
NF	0.84
%ile	99.4

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.80	96.0	0.92	PtpAffx.200110.1.S1_at	pmrna195	glycosyl transferase family 37	-	3e-15	At2g03210	FUT2 (FUCOSYLTRANSFERASE 2)	O.I.	H.G.	S.X.	Please selecteFP Browser (expression)
0.83	97.0	0.92	PtpAffx.7936.2.A1_at	CV244968	-	-	8e-6	At3g06350	MEE32 (MATERNAL EFFECT EMBRYO ARREST 32)	O.I.	H.G.	S.X.	Please selecteFP Browser (expression)
0.80	96.0	0.93	PtpAffx.78230.1.A1_at	CV264826	hypothetical protein	-	7e-12	At4g01700	chitinase, putative	O.I.	H.G.	S.X.	Please selecteFP Browser (expression)
0.80	96.0	0.93	PtpAffx.224549.1.S1_s_at	pmrna43182	hypothetical protein	-	8e-3	At1g05250	peroxidase, putative	O.I.	H.G.	S.X.	Please selecteFP Browser (expression)
0.67	91.1	0.95	PtpAffx.225309.1.S1_s_at	pmrna44567	hypothetical protein	-	2e-1	At5g39580	peroxidase, putative	O.I.	H.G.	S.X.	Please selecteFP Browser (expression)
0.60	86.0	0.96	PtpAffx.86209.1.S1_at	CV272652	hypothetical protein	-	1e-7	At5g66490	unknown protein	O.I.	H.G.	S.X.	Please selecteFP Browser (expression)

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
6.6	97.9	GSM328483	Populus x canescens root control_rep_06	GSE13109	Effect of hypoxia on gene expression in Grey poplar
4.4	95.9	GSM328566	Populus x canescens root hypoxia_rep_08	GSE13109	Effect of hypoxia on gene expression in Grey poplar
3.1	93.2	GSM328281	Populus x canescens root control_rep_02	GSE13109	Effect of hypoxia on gene expression in Grey poplar
3.1	93.2	GSM136938	Poplar contacted with P. aeruginosa PAO1 in 1 x hrp + 0.25 % sucrose	GSE5887	Pseudomonas aeruginosa PAO1 virulent genes in the poplar rhizosphere
3.0	92.9	GSM327406	Populus balsamifera_1006_young_leaf_midday_3	GSE13990	Populus balsamifera developmental tissue series
2.8	92.1	GSM327658	Populus balsamifera_Female_Catkin_midday_3	GSE13990	Populus balsamifera developmental tissue series
2.6	91.3	GSM328563	Populus x canescens root hypoxia_rep_05	GSE13109	Effect of hypoxia on gene expression in Grey poplar
2.6	91.3	GSM327660	Populus balsamifera_Male_Catkin_midday_2	GSE13990	Populus balsamifera developmental tissue series
2.5	90.9	GSM327657	Populus balsamifera_Female_Catkin_midday_2	GSE13990	Populus balsamifera developmental tissue series
2.3	89.8	GSM327656	Populus balsamifera_Female_Catkin_midday_1	GSE13990	Populus balsamifera developmental tissue series

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Hordeum_vulgare

Oryza_sativa

Triticum_aestivum

Vitis_vinifera

Zea_mays

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