Co-expression analysis

Gene ID	PtpAffx.18890.2.S1_at
Gene name	magnesium transporter
Homology with Arabidopsis	Similar to At3g19640: magnesium transporter CorA-like family protein (MRS2-3) (HF=4e-22)
Module size	10 genes
NF	0.45
%ile	74.0

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.60	86.0	0.93	PtpAffx.18890.2.S1_at	CK106884	magnesium transporter	-	4e-22	At3g19640	magnesium transporter CorA-like family protein (MRS2-3)	O.I.	H.G.	S.X.	Please selecteFP Browser (expression)
0.53	80.5	0.93	Ptp.5603.1.S1_at	CK099336	hypothetical protein	-	9e-1	At5g15440	EDL1 (EID1-like 1)	O.I.	H.G.	S.X.	Please selecteFP Browser (expression)
0.53	80.5	0.95	Ptp.1195.1.S1_at	BU824687	-	-	9e-24	At3g02580	STE1 (STEROL 1)	O.I.	H.G.	S.X.	Please selecteFP Browser (expression)
0.52	79.4	0.94	PtpAffx.20342.1.A1_at	CK089631	-	-	5e+0	Atcg00070	-	O.I.	H.G.	S.X.	Please selecteFP Browser (expression)
0.44	71.9	0.95	Ptp.7529.1.S1_at	DN495630	hypothetical protein	-	1e-45	At3g28460	unknown protein	O.I.	H.G.	S.X.	Please selecteFP Browser (expression)
0.43	69.7	0.96	Ptp.830.1.S1_at	CK088988	hypothetical protein	-	3e-2	At1g66970	SVL2 (SHV3-LIKE 2)	O.I.	H.G.	S.X.	Please selecteFP Browser (expression)
0.42	68.6	0.95	PtpAffx.35551.1.A1_at	DN485954	hypothetical protein	-	2e-1	At2g44820	unknown protein	O.I.	H.G.	S.X.	Please selecteFP Browser (expression)
0.37	62.3	0.95	PtpAffx.78267.1.S1_s_at	CV249797	hypothetical protein	-	1e-4	At4g02600	MLO1	O.I.	H.G.	S.X.	Please selecteFP Browser (expression)
0.32	55.2	0.92	PtpAffx.127102.1.A1_s_at	CV271691	hypothetical protein	-	3e+0	At5g46530	-	O.I.	H.G.	S.X.	Please selecteFP Browser (expression)
0.30	52.0	0.96	Ptp.2261.1.S1_at	CK089624	hypothetical protein	-	1e-4	At2g23560	MES7 (METHYL ESTERASE 7)	O.I.	H.G.	S.X.	Please selecteFP Browser (expression)

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
4.3	95.8	GSM334226	Populus balsamifera_1006_mature_leaf_midday_3	GSE13990	Populus balsamifera developmental tissue series
3.3	93.7	GSM327661	Populus balsamifera_Male_Catkin_midday_3	GSE13990	Populus balsamifera developmental tissue series
2.8	92.1	GSM372089	Clone3200_LPI2_N+_4w_rep1	GSE14893	Comparative transcriptomics analysis of Populus leaves under nitrogen limitation: clone 3200
2.6	91.3	GSM327407	Populus balsamifera_1006_root_midday_1	GSE13990	Populus balsamifera developmental tissue series
2.5	90.9	GSM372090	Clone3200_LPI2_N+_4w_rep2	GSE14893	Comparative transcriptomics analysis of Populus leaves under nitrogen limitation: clone 3200
2.4	90.4	GSM334225	Populus balsamifera_1006_mature_leaf_midday_2	GSE13990	Populus balsamifera developmental tissue series
2.1	88.6	GSM327408	Populus balsamifera_1006_root_midday_2	GSE13990	Populus balsamifera developmental tissue series
1.9	87.2	GSM362884	Clone1979_LPI2_N+_4w_rep2	GSE14515	Comparative transcriptomics analysis of Populus leaves under nitrogen limitation: clone 1979
1.8	86.4	GSM328534	Populus x canescens root control_rep_07	GSE13109	Effect of hypoxia on gene expression in Grey poplar
1.7	85.5	GSM328561	Populus x canescens root control_rep_12	GSE13109	Effect of hypoxia on gene expression in Grey poplar

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Hordeum_vulgare

Oryza_sativa

Triticum_aestivum

Vitis_vinifera

Zea_mays

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