Co-expression analysis

Gene ID	PtpAffx.18236.1.S1_at
Gene name	hypothetical protein
Homology with Arabidopsis	Similar to At1g09645: unknown protein (HF=1e-10)
Module size	10 genes
NF	0.40
%ile	68.3

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.84	97.1	0.94	PtpAffx.18236.1.S1_at	CV272788	hypothetical protein	-	1e-10	At1g09645	unknown protein	O.I.	H.G.	S.X.	Please selecteFP Browser (expression)
0.71	92.6	0.94	PtpAffx.223426.1.S1_at	pmrna41429	mitochondrial phosphate carrier protein	-	2e-74	At5g14040	mitochondrial phosphate transporter	O.I.	H.G.	S.X.	Please selecteFP Browser (expression)
0.53	80.5	0.93	PtpAffx.206496.1.S1_at	pmrna12888	hypothetical protein	-	5e-33	At4g02050	sugar transporter, putative	O.I.	H.G.	S.X.	Please selecteFP Browser (expression)
0.42	68.6	0.95	PtpAffx.120529.1.A1_s_at	CV275657	hypothetical protein	-	2e-7	At1g72170	unknown protein	O.I.	H.G.	S.X.	Please selecteFP Browser (expression)
0.42	68.6	0.95	PtpAffx.3546.1.A1_at	CV241865	hypothetical protein	-	3e-33	At5g10730	binding / catalytic/ coenzyme binding	O.I.	H.G.	S.X.	Please selecteFP Browser (expression)
0.35	59.7	0.94	PtpAffx.23406.1.S1_at	CK091295	hypothetical protein	-	7e-1	At1g70960	F-box family protein	O.I.	H.G.	S.X.	Please selecteFP Browser (expression)
0.31	53.7	0.97	PtpAffx.207061.1.S1_s_at	pmrna13997	hypothetical protein	-	3e-109	At5g64030	dehydration-responsive protein-related	O.I.	H.G.	S.X.	Please selecteFP Browser (expression)
0.29	50.5	0.94	PtpAffx.210790.1.S1_s_at	pmrna21170	hypothetical protein	-	4e-27	At4g25360	-	O.I.	H.G.	S.X.	Please selecteFP Browser (expression)
0.26	45.2	0.94	PtpAffx.14532.1.A1_at	CK090232	hypothetical protein	-	3e-2	At5g64020	unknown protein	O.I.	H.G.	S.X.	Please selecteFP Browser (expression)
0.22	38.3	0.94	Ptp.2292.1.A1_s_at	CV232695	hypothetical protein	-	4e-125	At4g35950	ARAC6 (ARABIDOPSIS RAC-LIKE 6)	O.I.	H.G.	S.X.	Please selecteFP Browser (expression)

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
6.3	97.7	GSM327656	Populus balsamifera_Female_Catkin_midday_1	GSE13990	Populus balsamifera developmental tissue series
6.0	97.5	GSM327659	Populus balsamifera_Male_Catkin_midday_1	GSE13990	Populus balsamifera developmental tissue series
5.8	97.4	GSM327658	Populus balsamifera_Female_Catkin_midday_3	GSE13990	Populus balsamifera developmental tissue series
5.8	97.4	GSM327660	Populus balsamifera_Male_Catkin_midday_2	GSE13990	Populus balsamifera developmental tissue series
5.1	96.8	GSM327657	Populus balsamifera_Female_Catkin_midday_2	GSE13990	Populus balsamifera developmental tissue series
4.4	95.9	GSM327661	Populus balsamifera_Male_Catkin_midday_3	GSE13990	Populus balsamifera developmental tissue series
2.3	89.8	GSM372097	Clone3200_LPI5_N-_8w_rep1	GSE14893	Comparative transcriptomics analysis of Populus leaves under nitrogen limitation: clone 3200
2.1	88.6	GSM372096	Clone3200_LPI5_N-_4w_rep2	GSE14893	Comparative transcriptomics analysis of Populus leaves under nitrogen limitation: clone 3200
1.5	83.5	GSM372098	Clone3200_LPI5_N-_8w_rep2	GSE14893	Comparative transcriptomics analysis of Populus leaves under nitrogen limitation: clone 3200
1.5	83.5	GSM327404	Populus balsamifera_1006_young_leaf_midday_1	GSE13990	Populus balsamifera developmental tissue series

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Hordeum_vulgare

Oryza_sativa

Triticum_aestivum

Vitis_vinifera

Zea_mays

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