Co-expression analysis

Gene ID PtpAffx.18096.1.A1_at
Gene name
Homology with ArabidopsisSimilar to At1g78800: glycosyl transferase family 1 protein (HF=1e-6)
Module size 17 genes
NF 0.42
%ile 70.5

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.6588.60.95PtpAffx.18096.1.A1_atCV261250--1e-6At1g78800glycosyl transferase family 1 proteinO.I.H.G.S.X.
0.7192.60.97PtpAffx.12741.1.A1_atCV234093--8e-2At4g08230glycine-rich proteinO.I.H.G.S.X.
0.5279.40.97Ptp.4622.1.S1_s_atBP930041hypothetical protein-7e-93At1g78900VHA-A (VACUOLAR ATP SYNTHASE SUBUNIT A)O.I.H.G.S.X.
0.4774.60.97Ptp.1338.1.A1_atCV245431--2e-55At5g03730CTR1 (CONSTITUTIVE TRIPLE RESPONSE 1)O.I.H.G.S.X.
0.4471.90.96Ptp.6541.1.S1_a_atCV227360hypothetical protein-1e-32At1g63290ribulose-phosphate 3-epimerase, cytosolic, putative / pentose-5-phosphate 3-epimerase, putativeO.I.H.G.S.X.
0.4369.70.97PtpAffx.18888.2.S1_atCV268392hypothetical protein-5e-9At3g14010CID4 (CTC-Interacting Domain 4)O.I.H.G.S.X.
0.3964.60.96Ptp.5696.1.S1_s_atCV240717hypothetical protein-5e-41At2g19830SNF7.2O.I.H.G.S.X.
0.3964.60.97PtpAffx.39424.1.S1_atCV231501hypothetical protein-4e-48At1g30640protein kinase, putativeO.I.H.G.S.X.
0.3863.70.97PtpAffx.108603.1.A1_s_atCV279639hypothetical protein-8e-1At5g59420ORP3C (OSBP(OXYSTEROL BINDING PROTEIN)-RELATED PROTEIN 3C)O.I.H.G.S.X.
0.3559.70.97PtpAffx.11565.1.A1_atCV241013hypothetical protein-2e-12At4g27000ATRBP45CO.I.H.G.S.X.
0.3559.70.96PtpAffx.30368.1.S1_atCV254627hypothetical protein-1e-1At1g76180ERD14 (EARLY RESPONSE TO DEHYDRATION 14)O.I.H.G.S.X.
0.3458.30.97PtpAffx.2772.1.S1_atCV245214--2e-65At5g08190NF-YB12 (NUCLEAR FACTOR Y, SUBUNIT B12)O.I.H.G.S.X.
0.3357.50.97PtpAffx.100467.1.S1_atCX657915hypothetical protein-8e-40At4g16144-O.I.H.G.S.X.
0.3153.70.96Ptp.1847.1.A1_s_atCK093485hypothetical protein-7e-17At2g23070casein kinase II alpha chain, putativeO.I.H.G.S.X.
0.3153.70.97PtpAffx.6505.1.A1_s_atCV238517hypothetical protein-2e-36At3g25800PP2AA2 (PROTEIN PHOSPHATASE 2A SUBUNIT A2)O.I.H.G.S.X.
0.3153.70.97PtpAffx.48817.3.S1_a_atCV262816hypothetical protein-5e-101At3g14100oligouridylate-binding protein, putativeO.I.H.G.S.X.
0.2645.20.97PtpAffx.210951.1.S1_atpmrna21517hypothetical protein-2e-34At3g05010transmembrane protein, putativeO.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
6.697.9GSM327413Populus balsamifera_1006_differentiating_xylem_midday_3GSE13990Populus balsamifera developmental tissue seriesLink to GEO
4.395.8GSM327412Populus balsamifera_1006_differentiating_xylem_midday_2GSE13990Populus balsamifera developmental tissue seriesLink to GEO
2.490.4GSM327411Populus balsamifera_1006_differentiating_xylem_midday_1GSE13990Populus balsamifera developmental tissue seriesLink to GEO
2.188.6GSM327408Populus balsamifera_1006_root_midday_2GSE13990Populus balsamifera developmental tissue seriesLink to GEO
1.987.2GSM327398Populus balsamifera_20071015_Etiolated_seedling_6d_transfered_to_light_3h_3GSE13990Populus balsamifera developmental tissue seriesLink to GEO
1.886.4GSM327397Populus balsamifera_20071015_Etiolated_seedling_6d_transfered_to_light_3h_2GSE13990Populus balsamifera developmental tissue seriesLink to GEO
1.785.5GSM327407Populus balsamifera_1006_root_midday_1GSE13990Populus balsamifera developmental tissue seriesLink to GEO
1.684.5GSM372042Clone1979_LPI5_N-_8w_rep1GSE14515Comparative transcriptomics analysis of Populus leaves under nitrogen limitation: clone 1979Link to GEO
1.583.5GSM327409Populus balsamifera_1006_root_midday_3GSE13990Populus balsamifera developmental tissue seriesLink to GEO
1.583.5GSM327659Populus balsamifera_Male_Catkin_midday_1GSE13990Populus balsamifera developmental tissue seriesLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Triticum_aestivum
Vitis_vinifera
Zea_mays



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