Co-expression analysis

Gene ID PtpAffx.17732.1.A1_at
Gene name
Homology with ArabidopsisSimilar to At3g44450: unknown protein (HF=1e+0)
Module size 6 genes
NF 0.10
%ile 19.8

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.9199.20.91PtpAffx.17732.1.A1_atCV276389--1e+0At3g44450unknown proteinO.I.H.G.S.X.
0.1525.30.94PtpAffx.27058.1.S1_atAJ779778hypothetical protein-8e-14At5g63135unknown proteinO.I.H.G.S.X.
0.1118.10.94Ptp.2051.1.S1_atCV243394hypothetical protein-2e-16At2g39990EIF2O.I.H.G.S.X.
0.0812.90.92PtpAffx.50373.1.A1_atCV246681--5e-1At5g38440self-incompatibility protein-relatedO.I.H.G.S.X.
0.0711.60.94PtpAffx.213713.1.S1_atpmrna26762hypothetical protein-3e-9At3g51650unknown proteinO.I.H.G.S.X.
0.035.20.93PtpAffx.47876.2.S1_atCV252827--2e-15At3g57785unknown proteinO.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
3.594.3GSM327660Populus balsamifera_Male_Catkin_midday_2GSE13990Populus balsamifera developmental tissue seriesLink to GEO
2.490.4GSM327656Populus balsamifera_Female_Catkin_midday_1GSE13990Populus balsamifera developmental tissue seriesLink to GEO
2.389.8GSM327659Populus balsamifera_Male_Catkin_midday_1GSE13990Populus balsamifera developmental tissue seriesLink to GEO
2.389.8GSM327404Populus balsamifera_1006_young_leaf_midday_1GSE13990Populus balsamifera developmental tissue seriesLink to GEO
2.289.3GSM327411Populus balsamifera_1006_differentiating_xylem_midday_1GSE13990Populus balsamifera developmental tissue seriesLink to GEO
2.088.0GSM362888Clone1979_LPI5_N+_4w_rep2GSE14515Comparative transcriptomics analysis of Populus leaves under nitrogen limitation: clone 1979Link to GEO
1.886.4GSM328105Populus x canescens leaf hypoxia_rep_01GSE13109Effect of hypoxia on gene expression in Grey poplarLink to GEO
1.886.4GSM327412Populus balsamifera_1006_differentiating_xylem_midday_2GSE13990Populus balsamifera developmental tissue seriesLink to GEO
1.886.4GSM328077Populus x canescens leaf control_rep_06GSE13109Effect of hypoxia on gene expression in Grey poplarLink to GEO
1.785.5GSM362885Clone1979_LPI2_N-_4w_rep1GSE14515Comparative transcriptomics analysis of Populus leaves under nitrogen limitation: clone 1979Link to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Triticum_aestivum
Vitis_vinifera
Zea_mays



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