Co-expression analysis

Gene ID PtpAffx.1747.1.A1_at
Gene name hypothetical protein
Homology with ArabidopsisSimilar to At3g24180: catalytic/ glucosylceramidase (HF=1e-41)
Module size 28 genes
NF 0.33
%ile 57.3

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.8797.50.88PtpAffx.1747.1.A1_atCN520088hypothetical protein-1e-41At3g24180catalytic/ glucosylceramidaseO.I.H.G.S.X.
0.5582.20.92PtpAffx.1387.1.A1_atCV245031hypothetical protein-1e-26At1g07080gamma interferon responsive lysosomal thiol reductase family protein / GILT family proteinO.I.H.G.S.X.
0.5279.40.92PtpAffx.9794.3.S1_atCV229538hypothetical protein-6e-3At1g68552CPuORF53 (Conserved peptide upstream open reading frame 53)O.I.H.G.S.X.
0.4167.70.92PtpAffx.37036.2.S1_a_atCV267839--3e-1At1g28550AtRABA1i (Arabidopsis Rab GTPase homolog A1i)O.I.H.G.S.X.
0.4167.70.90PtpAffx.208677.1.S1_atpmrna17211hypothetical protein-0At2g42490copper amine oxidase, putativeO.I.H.G.S.X.
0.4067.00.92PtpAffx.107516.1.A1_atCV278833hypothetical protein-5e-15At3g12650unknown proteinO.I.H.G.S.X.
0.4067.00.93Ptp.4962.2.A1_atCV230541hypothetical protein-2e-1At5g14180MPL1 (MYZUS PERSICAE-INDUCED LIPASE 1)O.I.H.G.S.X.
0.3964.60.91Ptp.441.1.A1_atCV251242hypothetical protein-9e-55At1g7921020S proteasome alpha subunit B, putativeO.I.H.G.S.X.
0.3661.60.92PtpAffx.122552.1.S1_atBP936900hypothetical protein-3e-41At5g37310-O.I.H.G.S.X.
0.3559.70.92Ptp.5410.1.S1_atCV249787hypothetical protein-2e-9At5g16450dimethylmenaquinone methyltransferase family proteinO.I.H.G.S.X.
0.3458.30.92PtpAffx.44424.1.A1_atCX176243--2e+0At3g13224RNA recognition motif (RRM)-containing proteinO.I.H.G.S.X.
0.3458.30.93PtpAffx.135582.1.A1_atCV271788hypothetical protein-2e+0At1g76630tetratricopeptide repeat (TPR)-containing proteinO.I.H.G.S.X.
0.3458.30.92PtpAffx.202437.1.S1_atpmrna4883hypothetical protein-8e-65At3g58640protein kinase family proteinO.I.H.G.S.X.
0.3357.50.92PtpAffx.152437.1.S1_atCV254283hypothetical protein-1e-69At3g59920ATGDI2 (RAB GDP DISSOCIATION INHIBITOR 2)O.I.H.G.S.X.
0.3255.20.92PtpAffx.147692.1.A1_atCV228460--7e-1At2g24615-O.I.H.G.S.X.
0.3153.70.92PtpAffx.101944.1.A1_atCV244098hypothetical protein-2e+0At4g33940zinc finger (C3HC4-type RING finger) family proteinO.I.H.G.S.X.
0.3153.70.88Ptp.3105.1.S1_s_atCV273467hypothetical protein-4e-78At5g61840GUT1O.I.H.G.S.X.
0.3153.70.92PtpAffx.204617.1.S1_atpmrna9071hypothetical protein-5e-9At1g19400unknown proteinO.I.H.G.S.X.
0.3052.00.90PtpAffx.17389.1.S1_atCV265693hypothetical protein-6e-5At2g03640nuclear transport factor 2 (NTF2) family protein / RNA recognition motif (RRM)-containing proteinO.I.H.G.S.X.
0.3052.00.91Ptp.1011.1.S1_atCV271147hypothetical protein-6e-1At5g27710unknown proteinO.I.H.G.S.X.
0.2950.50.91PtpAffx.140440.1.A1_atCV258012--5e-1At4g08868unknown proteinO.I.H.G.S.X.
0.2441.80.92PtpAffx.19715.1.A1_atCV263893hypothetical protein-7e-10At2g20230-O.I.H.G.S.X.
0.2340.50.91PtpAffx.18640.1.A1_atCV239752hypothetical protein-3e-45At5g1838040S ribosomal protein S16 (RPS16C)O.I.H.G.S.X.
0.2238.30.92PtpAffx.65832.1.A1_atCV237062--2e-6At4g11420EIF3A (EUKARYOTIC TRANSLATION INITIATION FACTOR 3A)O.I.H.G.S.X.
0.1729.10.92PtpAffx.154199.1.S1_atCV225725--4e-17At5g56020-O.I.H.G.S.X.
0.1729.10.94PtpAffx.5122.1.A1_s_atCV274469histone ubiquitination proteins group-1e-84At1g14400UBC1 (UBIQUITIN CARRIER PROTEIN 1)O.I.H.G.S.X.
0.1525.30.90PtpAffx.122552.2.S1_atCV226732hypothetical protein-6e-43At5g37310-O.I.H.G.S.X.
0.1321.60.95PtpAffx.206373.1.S1_atpmrna12651hypothetical protein-0At5g20490XIKO.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
3.694.5GSM327661Populus balsamifera_Male_Catkin_midday_3GSE13990Populus balsamifera developmental tissue seriesLink to GEO
3.092.9GSM327413Populus balsamifera_1006_differentiating_xylem_midday_3GSE13990Populus balsamifera developmental tissue seriesLink to GEO
2.691.3GSM327411Populus balsamifera_1006_differentiating_xylem_midday_1GSE13990Populus balsamifera developmental tissue seriesLink to GEO
2.590.9GSM327404Populus balsamifera_1006_young_leaf_midday_1GSE13990Populus balsamifera developmental tissue seriesLink to GEO
2.389.8GSM327412Populus balsamifera_1006_differentiating_xylem_midday_2GSE13990Populus balsamifera developmental tissue seriesLink to GEO
1.785.5GSM372098Clone3200_LPI5_N-_8w_rep2GSE14893Comparative transcriptomics analysis of Populus leaves under nitrogen limitation: clone 3200Link to GEO
1.482.3GSM372042Clone1979_LPI5_N-_8w_rep1GSE14515Comparative transcriptomics analysis of Populus leaves under nitrogen limitation: clone 1979Link to GEO
1.482.3GSM334224Populus balsamifera_1006_mature_leaf_midday_1GSE13990Populus balsamifera developmental tissue seriesLink to GEO
1.381.0GSM328285Populus x canescens root control_rep_04GSE13109Effect of hypoxia on gene expression in Grey poplarLink to GEO
1.279.6GSM328565Populus x canescens root hypoxia_rep_07GSE13109Effect of hypoxia on gene expression in Grey poplarLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Triticum_aestivum
Vitis_vinifera
Zea_mays



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