Co-expression analysis

Gene ID PtpAffx.161118.1.S1_s_at
Gene name hypothetical protein
Homology with ArabidopsisSimilar to At4g16760: ACX1 (ACYL-COA OXIDASE 1) (HF=6e-18)
Module size 7 genes
NF 0.60
%ile 90.5

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.7192.60.96PtpAffx.161118.1.S1_s_atCK319174hypothetical protein-6e-18At4g16760ACX1 (ACYL-COA OXIDASE 1)O.I.H.G.S.X.
0.8397.00.96PtpAffx.150314.1.S1_atBU869295hypothetical protein-1e-6At3g62770AtATG18aO.I.H.G.S.X.
0.6086.00.97PtpAffx.99255.1.S1_s_atCK090997hypothetical protein-3e-2At3g59770SAC9O.I.H.G.S.X.
0.5582.20.97PtpAffx.79437.1.S1_s_atCX168134hypothetical protein-5e-43At2g30980ASKdZeta (Arabidopsis SHAGGY-related protein kinase dZeta)O.I.H.G.S.X.
0.4369.70.96PtpAffx.113579.1.S1_s_atCA930280hypothetical protein-4e-31At1g28490SYP61 (SYNTAXIN OF PLANTS 61)O.I.H.G.S.X.
0.4067.00.97PtpAffx.218689.1.S1_s_atpmrna34398aminophospholipid ATPase /// hypothetical protein /// aminophospholipid ATPase-4e-70At1g59820ALA3 (Aminophospholipid ATPase3)O.I.H.G.S.X.
0.3357.50.97Ptp.2072.2.S1_s_atCA931719hypothetical protein-6e-83At3g46060ATRAB8AO.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
5.897.4GSM327404Populus balsamifera_1006_young_leaf_midday_1GSE13990Populus balsamifera developmental tissue seriesLink to GEO
4.395.8GSM327658Populus balsamifera_Female_Catkin_midday_3GSE13990Populus balsamifera developmental tissue seriesLink to GEO
3.995.1GSM327661Populus balsamifera_Male_Catkin_midday_3GSE13990Populus balsamifera developmental tissue seriesLink to GEO
3.794.7GSM327409Populus balsamifera_1006_root_midday_3GSE13990Populus balsamifera developmental tissue seriesLink to GEO
3.393.7GSM327657Populus balsamifera_Female_Catkin_midday_2GSE13990Populus balsamifera developmental tissue seriesLink to GEO
3.193.2GSM328105Populus x canescens leaf hypoxia_rep_01GSE13109Effect of hypoxia on gene expression in Grey poplarLink to GEO
3.092.9GSM328560Populus x canescens root control_rep_11GSE13109Effect of hypoxia on gene expression in Grey poplarLink to GEO
2.490.4GSM327659Populus balsamifera_Male_Catkin_midday_1GSE13990Populus balsamifera developmental tissue seriesLink to GEO
2.289.3GSM334226Populus balsamifera_1006_mature_leaf_midday_3GSE13990Populus balsamifera developmental tissue seriesLink to GEO
2.289.3GSM327660Populus balsamifera_Male_Catkin_midday_2GSE13990Populus balsamifera developmental tissue seriesLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Triticum_aestivum
Vitis_vinifera
Zea_mays



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