| Gene ID | PtpAffx.16082.2.S1_a_at |
| Gene name | hypothetical protein |
| Homology with Arabidopsis | Similar to At5g13260: unknown protein (HF=2e-11) |
| Module size | 6 genes |
| NF | 0.35 |
| %ile | 61.2 |
| VF | %ile | CC | Gene ID | Repr. ID | Gene name | Func. | Ev | AGI code | Arabidopsis gene name | O.I. | H.G. | S.X. | Other DB |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 0.44 | 71.9 | 0.92 | PtpAffx.16082.2.S1_a_at | CV232704 | hypothetical protein | - | 2e-11 | At5g13260 | unknown protein | O.I. | H.G. | S.X. | |
| 0.60 | 86.0 | 0.95 | Ptp.3059.1.A1_s_at | CV227410 | hypothetical protein | - | 5e-13 | At5g33320 | CUE1 (CAB UNDEREXPRESSED 1) | O.I. | H.G. | S.X. | |
| 0.38 | 63.7 | 0.93 | PtpAffx.95211.1.A1_a_at | CB239540 | hypothetical protein | - | 4e+0 | At2g41082 | unknown protein | O.I. | H.G. | S.X. | |
| 0.32 | 55.2 | 0.93 | Ptp.2370.1.A1_at | CV228969 | hypothetical protein | - | 2e-77 | At5g49460 | ACLB-2 (ATP CITRATE LYASE SUBUNIT B 2) | O.I. | H.G. | S.X. | |
| 0.31 | 53.7 | 0.94 | PtpAffx.160058.1.A1_at | CV230119 | hypothetical protein | - | 7e-3 | At4g00905 | - | O.I. | H.G. | S.X. | |
| 0.17 | 29.1 | 0.94 | Ptp.5538.1.S1_s_at | AI162588 | hypothetical protein | - | 1e-31 | At5g50370 | adenylate kinase, putative | O.I. | H.G. | S.X. |
| Std2 GX | %ile | GSM ID | Assay name | GSE ID | Experiment title | Link to GEO |
|---|---|---|---|---|---|---|
| 7.7 | 98.3 | GSM327413 | Populus balsamifera_1006_differentiating_xylem_midday_3 | GSE13990 | Populus balsamifera developmental tissue series | |
| 6.7 | 97.9 | GSM327411 | Populus balsamifera_1006_differentiating_xylem_midday_1 | GSE13990 | Populus balsamifera developmental tissue series | |
| 4.5 | 96.1 | GSM327412 | Populus balsamifera_1006_differentiating_xylem_midday_2 | GSE13990 | Populus balsamifera developmental tissue series | |
| 2.6 | 91.3 | GSM372099 | Clone3200_LPI5_N+_8w_rep1 | GSE14893 | Comparative transcriptomics analysis of Populus leaves under nitrogen limitation: clone 3200 | |
| 2.5 | 90.9 | GSM372089 | Clone3200_LPI2_N+_4w_rep1 | GSE14893 | Comparative transcriptomics analysis of Populus leaves under nitrogen limitation: clone 3200 | |
| 2.2 | 89.3 | GSM372091 | Clone3200_LPI2_N-_4w_rep1 | GSE14893 | Comparative transcriptomics analysis of Populus leaves under nitrogen limitation: clone 3200 | |
| 2.2 | 89.3 | GSM328567 | Populus x canescens root hypoxia_rep_09 | GSE13109 | Effect of hypoxia on gene expression in Grey poplar | |
| 1.8 | 86.4 | GSM328565 | Populus x canescens root hypoxia_rep_07 | GSE13109 | Effect of hypoxia on gene expression in Grey poplar | |
| 1.8 | 86.4 | GSM362887 | Clone1979_LPI5_N+_4w_rep1 | GSE14515 | Comparative transcriptomics analysis of Populus leaves under nitrogen limitation: clone 1979 | |
| 1.7 | 85.5 | GSM328564 | Populus x canescens root hypoxia_rep_06 | GSE13109 | Effect of hypoxia on gene expression in Grey poplar | |
| VF | %ile | Gene ID | Repr. ID | Gene Name | Func. | Ev | AGI code | Arabidopsis gene name | O.I. | H.G. | S.X. | Other DB |
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 0.65 | 83.8 | Os01g0928100 | At5g13260 | - | Conserved hypothetical protein | 5e-12 | At3g48860 | unknown protein | O.I. | H.G. | S.X. | |
| 0.77 | 93.1 | Os03g0355600 | At5g13260 | - | Adapter-related protein complex 1 beta 1 subunit(Beta-adaptin 1) (Adaptor protein complex AP-1 beta-1subunit) (Golgi adaptor HA1/AP1 adaptin beta subunit)(Clathrin assembly protein complex 1 beta large chain).Splice isoform B | 0 | At4g23460 | beta-adaptin, putative | O.I. | H.G. | S.X. | |
| 0.70 | 88.4 | Os03g0227000 | At5g13260 | - | Coatomer gamma subunit (Gamma-coat protein)(Gamma-COP) | 1e-25 | At4g34450 | coatomer gamma-2 subunit, putative / gamma-2 coat protein, putative / gamma-2 COP, putative | O.I. | H.G. | S.X. | |
| 0.64 | 83.4 | Os08g0248900 | At5g13260 | - | ADP-ribosylation factor 3 | 2e-46 | At2g24765 | ARF3 (ADP-RIBOSYLATION FACTOR 3) | O.I. | H.G. | S.X. | |
| 0.61 | 81.2 | Os06g0618600 | At5g13260 | - | Conserved hypothetical protein | 8e-8 | At1g50120 | - | O.I. | H.G. | S.X. | |
| 0.61 | 81.2 | Os03g0265700 | At5g13260 | - | SH3 domain containing protein | 6e-50 | At2g07360 | SH3 domain-containing protein | O.I. | H.G. | S.X. | |
| 0.55 | 73.7 | Os02g0537900 | At5g13260 | - | Vacuolar-type H+-translocating inorganicpyrophosphatase (EC 3.6.1.1) | 5e-87 | At1g16780 | vacuolar-type H+-translocating inorganic pyrophosphatase, putative | O.I. | H.G. | S.X. | |
| 0.54 | 71.9 | Os02g0690700 | At5g13260 | - | Clathrin adaptor complex, medium chain familyprotein | 3e+0 | At1g19770 | ATPUP14 | O.I. | H.G. | S.X. | |
| 0.52 | 69.6 | Os07g0657200 | At5g13260 | - | WD40-like domain containing protein | 3e-8 | At3g63460 | WD-40 repeat family protein | O.I. | H.G. | S.X. | |
| 0.50 | 68.0 | Os05g0556100 | At5g13260 | - | SDL5A | 1e-43 | At3g61760 | ADL1B (ARABIDOPSIS DYNAMIN-LIKE 1B) | O.I. | H.G. | S.X. | |
| 0.46 | 60.9 | Os02g0832800 | At5g13260 | - | Alpha-1,3-mannosyl-glycoprotein beta-1,2-N-acetylglucosaminyltransferase (EC 2.4.1.101) | 5e-15 | At4g38240 | CGL1 (COMPLEX GLYCAN LESS 1) | O.I. | H.G. | S.X. | |
| 0.36 | 44.0 | Os03g0804300 | At5g13260 | - | Huntingtin-interacting protein 14 | 6e-14 | At3g60800 | zinc finger (DHHC type) family protein | O.I. | H.G. | S.X. | |
| 0.36 | 44.0 | Os01g0911200 | At5g13260 | - | Ribophorin II family protein | 1e-6 | At4g21150 | HAP6 (HAPLESS 6) | O.I. | H.G. | S.X. |
| Arabidopsis_thaliana |
| Glycine_max |
| Hordeum_vulgare |
| Triticum_aestivum |
| Vitis_vinifera |
| Zea_mays |
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