Co-expression analysis

Gene ID PtpAffx.1601.13.S1_a_at
Gene name hypothetical protein
Homology with ArabidopsisSimilar to At5g44306: unknown protein (HF=5e+0)
Module size 6 genes
NF 0.55
%ile 86.0

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.8397.00.95PtpAffx.1601.13.S1_a_atCV240068hypothetical protein-5e+0At5g44306unknown proteinO.I.H.G.S.X.
0.5784.20.95PtpAffx.5090.1.A1_atCV267261hypothetical protein-1e-1At3g09810isocitrate dehydrogenase, putative / NAD+ isocitrate dehydrogenase, putativeO.I.H.G.S.X.
0.5380.50.94PtpAffx.147676.1.A1_atCV230317hypothetical protein-3e-32At4g30600signal recognition particle receptor alpha subunit family proteinO.I.H.G.S.X.
0.5078.60.95PtpAffx.38755.2.S1_s_atCV252052hypothetical protein-2e-56At3g49870ATARLA1C (ADP-ribosylation factor-like A1C)O.I.H.G.S.X.
0.4774.60.94PtpAffx.222478.1.S1_atpmrna39929hypothetical protein-1e-48At1g67190F-box family proteinO.I.H.G.S.X.
0.3255.20.95Ptp.4510.1.S1_atCV261413hypothetical protein-1e-8At1g14140mitochondrial substrate carrier family proteinO.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
4.395.8GSM327661Populus balsamifera_Male_Catkin_midday_3GSE13990Populus balsamifera developmental tissue seriesLink to GEO
3.894.9GSM327658Populus balsamifera_Female_Catkin_midday_3GSE13990Populus balsamifera developmental tissue seriesLink to GEO
3.794.7GSM328275Populus x canescens leaf hypoxia_rep_03GSE13109Effect of hypoxia on gene expression in Grey poplarLink to GEO
3.794.7GSM327660Populus balsamifera_Male_Catkin_midday_2GSE13990Populus balsamifera developmental tissue seriesLink to GEO
3.494.0GSM327411Populus balsamifera_1006_differentiating_xylem_midday_1GSE13990Populus balsamifera developmental tissue seriesLink to GEO
3.092.9GSM244431non infected tissue, biological rep2GSE9673Comparative transcriptomic reveals signatures specific to various interactions with Melampsora rust fungiLink to GEO
2.992.5GSM327404Populus balsamifera_1006_young_leaf_midday_1GSE13990Populus balsamifera developmental tissue seriesLink to GEO
2.691.3GSM327659Populus balsamifera_Male_Catkin_midday_1GSE13990Populus balsamifera developmental tissue seriesLink to GEO
2.691.3GSM327412Populus balsamifera_1006_differentiating_xylem_midday_2GSE13990Populus balsamifera developmental tissue seriesLink to GEO
2.691.3GSM327413Populus balsamifera_1006_differentiating_xylem_midday_3GSE13990Populus balsamifera developmental tissue seriesLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Triticum_aestivum
Vitis_vinifera
Zea_mays



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