Co-expression analysis

Gene ID PtpAffx.158765.2.S1_s_at
Gene name hypothetical protein
Homology with ArabidopsisSimilar to At3g52950: CBS domain-containing protein / octicosapeptide/Phox/Bemp1 (PB1) domain-containing protein (HF=8e-35)
Module size 6 genes
NF 0.40
%ile 68.6

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.4471.90.96PtpAffx.158765.2.S1_s_atCF118958hypothetical protein-8e-35At3g52950CBS domain-containing protein / octicosapeptide/Phox/Bemp1 (PB1) domain-containing proteinO.I.H.G.S.X.
0.6187.00.96PtpAffx.204988.1.S1_atpmrna9879hypothetical protein-2e-89At3g45830unknown proteinO.I.H.G.S.X.
0.5380.50.96PtpAffx.130829.1.S1_atDN494496hypothetical protein-3e-23At2g15230ATLIP1 (Arabidopsis thaliana lipase 1)O.I.H.G.S.X.
0.3964.60.96PtpAffx.27692.3.A1_a_atCV258377hypothetical protein-7e-52At4g17270Mo25 family proteinO.I.H.G.S.X.
0.3255.20.96Ptp.493.1.S1_s_atAF187303.1hypothetical protein-1e-54At4g35360pantothenate kinase family proteinO.I.H.G.S.X.
0.2441.80.95Ptp.5804.1.S1_atBI130776hypothetical protein-2e-34At4g14716ATARD1 (ACIREDUCTONE DIOXYGENASE 1)O.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
2.892.1GSM328564Populus x canescens root hypoxia_rep_06GSE13109Effect of hypoxia on gene expression in Grey poplarLink to GEO
2.691.3GSM328565Populus x canescens root hypoxia_rep_07GSE13109Effect of hypoxia on gene expression in Grey poplarLink to GEO
2.590.9GSM328567Populus x canescens root hypoxia_rep_09GSE13109Effect of hypoxia on gene expression in Grey poplarLink to GEO
2.389.8GSM244435Mlp infected tissue, biological rep3GSE9673Comparative transcriptomic reveals signatures specific to various interactions with Melampsora rust fungiLink to GEO
2.289.3GSM244438Mmd infected tissue, biological rep3GSE9673Comparative transcriptomic reveals signatures specific to various interactions with Melampsora rust fungiLink to GEO
2.188.6GSM328562Populus x canescens root hypoxia_rep_04GSE13109Effect of hypoxia on gene expression in Grey poplarLink to GEO
2.088.0GSM244441Mixed infected tissue, biological rep3GSE9673Comparative transcriptomic reveals signatures specific to various interactions with Melampsora rust fungiLink to GEO
2.088.0GSM244439Mixed infected tissue, biological rep1GSE9673Comparative transcriptomic reveals signatures specific to various interactions with Melampsora rust fungiLink to GEO
2.088.0GSM244431non infected tissue, biological rep2GSE9673Comparative transcriptomic reveals signatures specific to various interactions with Melampsora rust fungiLink to GEO
1.987.2GSM244437Mmd infected tissue, biological rep2GSE9673Comparative transcriptomic reveals signatures specific to various interactions with Melampsora rust fungiLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Triticum_aestivum
Vitis_vinifera
Zea_mays



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