Co-expression analysis

Gene ID PtpAffx.158656.2.S1_at
Gene name hypothetical protein
Homology with ArabidopsisSimilar to At3g08030: unknown protein (HF=1e-4)
Module size 6 genes
NF 0.54
%ile 85.1

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.8096.00.95PtpAffx.158656.2.S1_atCX654035hypothetical protein-1e-4At3g08030unknown proteinO.I.H.G.S.X.
0.6187.00.93PtpAffx.203780.1.S1_atpmrna7465hypothetical protein-1e-4At3g09020alpha 1,4-glycosyltransferase family protein / glycosyltransferase sugar-binding DXD motif-containing proteinO.I.H.G.S.X.
0.6187.00.95Ptp.325.1.A1_s_atCK088352cytochrome P450-7e-3At1g01190CYP78A8O.I.H.G.S.X.
0.5078.60.94PtpAffx.207296.1.S1_atpmrna14470hypothetical protein-2e-4At4g37160sks15 (SKU5 Similar 15)O.I.H.G.S.X.
0.3661.60.95PtpAffx.212491.1.S1_atpmrna24460hypothetical protein-1e-1At3g29250copper ion binding / oxidoreductaseO.I.H.G.S.X.
0.3661.60.95PtpAffx.54756.1.S1_atBU830852hypothetical protein-2e-1At1g76070unknown proteinO.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
6.597.8GSM327660Populus balsamifera_Male_Catkin_midday_2GSE13990Populus balsamifera developmental tissue seriesLink to GEO
4.095.3GSM362883Clone1979_LPI2_N+_4w_rep1GSE14515Comparative transcriptomics analysis of Populus leaves under nitrogen limitation: clone 1979Link to GEO
3.995.1GSM327408Populus balsamifera_1006_root_midday_2GSE13990Populus balsamifera developmental tissue seriesLink to GEO
3.894.9GSM328105Populus x canescens leaf hypoxia_rep_01GSE13109Effect of hypoxia on gene expression in Grey poplarLink to GEO
3.494.0GSM327407Populus balsamifera_1006_root_midday_1GSE13990Populus balsamifera developmental tissue seriesLink to GEO
3.193.2GSM362888Clone1979_LPI5_N+_4w_rep2GSE14515Comparative transcriptomics analysis of Populus leaves under nitrogen limitation: clone 1979Link to GEO
2.590.9GSM327659Populus balsamifera_Male_Catkin_midday_1GSE13990Populus balsamifera developmental tissue seriesLink to GEO
2.590.9GSM327404Populus balsamifera_1006_young_leaf_midday_1GSE13990Populus balsamifera developmental tissue seriesLink to GEO
2.289.3GSM328066Populus x canescens leaf control_rep_04GSE13109Effect of hypoxia on gene expression in Grey poplarLink to GEO
2.088.0GSM372095Clone3200_LPI5_N-_4w_rep1GSE14893Comparative transcriptomics analysis of Populus leaves under nitrogen limitation: clone 3200Link to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Triticum_aestivum
Vitis_vinifera
Zea_mays



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