Co-expression analysis

Gene ID PtpAffx.158656.1.A1_a_at
Gene name hypothetical protein
Homology with ArabidopsisSimilar to At2g41810: - (HF=2e-4)
Module size 16 genes
NF 0.61
%ile 90.5

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.5078.60.87PtpAffx.158656.1.A1_a_atCV256722hypothetical protein-2e-4At2g41810-O.I.H.G.S.X.
0.7594.10.92PtpAffx.207305.1.S1_atpmrna14487hypothetical protein-7e-31At2g23540GDSL-motif lipase/hydrolase family proteinO.I.H.G.S.X.
0.7493.80.91PtpAffx.217339.1.S1_s_atpmrna32557hypothetical protein-1e-1At3g50400GDSL-motif lipase/hydrolase family proteinO.I.H.G.S.X.
0.7192.60.92PtpAffx.5070.1.A1_atCV273039--6e-4At2g18360hydrolase, alpha/beta fold family proteinO.I.H.G.S.X.
0.6991.50.92PtpAffx.95076.1.A1_atCV272114hypothetical protein-4e-1At5g52750heavy-metal-associated domain-containing proteinO.I.H.G.S.X.
0.6791.10.90PtpAffx.101338.1.A1_atCV268770hypothetical protein-1e-28At3g11430GPAT5 (GLYCEROL-3-PHOSPHATE ACYLTRANSFERASE 5)O.I.H.G.S.X.
0.6791.10.93PtpAffx.133471.1.A1_atCV272920hypothetical protein-1e-1At3g17210HS1 (HEAT STABLE PROTEIN 1)O.I.H.G.S.X.
0.6187.00.90PtpAffx.206946.1.S1_atpmrna13776hypothetical protein-3e+0At1g05920DNA bindingO.I.H.G.S.X.
0.6086.00.90PtpAffx.2274.1.S1_atCV262526hypothetical protein-6e+0At5g09530hydroxyproline-rich glycoprotein family proteinO.I.H.G.S.X.
0.5884.20.91PtpAffx.83904.1.S1_atBU824599--2e+0At2g01110APG2 (ALBINO AND PALE GREEN 2)O.I.H.G.S.X.
0.5683.90.94Ptp.3298.1.A1_s_atDN494977hypothetical protein-5e-1At2g18370protease inhibitor/seed storage/lipid transfer protein (LTP) family proteinO.I.H.G.S.X.
0.5582.20.87PtpAffx.981.1.S1_atCV258295hypothetical protein-2e-3At1g65680ATEXPB2 (ARABIDOPSIS THALIANA EXPANSIN B2)O.I.H.G.S.X.
0.5380.50.92PtpAffx.159361.1.A1_atCV276176hypothetical protein-2e-3At4g20390integral membrane family proteinO.I.H.G.S.X.
0.5279.40.91PtpAffx.204459.1.S1_atpmrna8744hypothetical protein-2e-16At5g22810GDSL-motif lipase, putativeO.I.H.G.S.X.
0.5078.60.92PtpAffx.23.1.A1_atCV263130hypothetical protein-1e-10At1g67030ZFP6 (ZINC FINGER PROTEIN 6)O.I.H.G.S.X.
0.4067.00.91PtpAffx.133567.1.A1_atCV270752white-brown-complex ABC transporter family /// white-brown-complex ABC transporter family-4e-6At5g13580ABC transporter family proteinO.I.H.G.S.X.

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Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
4.095.3GSM327660Populus balsamifera_Male_Catkin_midday_2GSE13990Populus balsamifera developmental tissue seriesLink to GEO
2.490.4GSM362889Clone1979_LPI5_N-_4w_rep1GSE14515Comparative transcriptomics analysis of Populus leaves under nitrogen limitation: clone 1979Link to GEO
2.188.6GSM327407Populus balsamifera_1006_root_midday_1GSE13990Populus balsamifera developmental tissue seriesLink to GEO
2.088.0GSM327661Populus balsamifera_Male_Catkin_midday_3GSE13990Populus balsamifera developmental tissue seriesLink to GEO
1.987.2GSM328558Populus x canescens root control_rep_09GSE13109Effect of hypoxia on gene expression in Grey poplarLink to GEO
1.987.2GSM327404Populus balsamifera_1006_young_leaf_midday_1GSE13990Populus balsamifera developmental tissue seriesLink to GEO
1.785.5GSM328566Populus x canescens root hypoxia_rep_08GSE13109Effect of hypoxia on gene expression in Grey poplarLink to GEO
1.785.5GSM327659Populus balsamifera_Male_Catkin_midday_1GSE13990Populus balsamifera developmental tissue seriesLink to GEO
1.785.5GSM328560Populus x canescens root control_rep_11GSE13109Effect of hypoxia on gene expression in Grey poplarLink to GEO
1.785.5GSM327658Populus balsamifera_Female_Catkin_midday_3GSE13990Populus balsamifera developmental tissue seriesLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Triticum_aestivum
Vitis_vinifera
Zea_mays



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