Co-expression analysis

Gene ID	PtpAffx.157395.1.S1_s_at
Gene name	hypothetical protein
Homology with Arabidopsis	Similar to At5g13860: ELC-Like (ELCH-like) (HF=2e-12)
Module size	7 genes
NF	0.25
%ile	45.1

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.57	84.2	0.95	PtpAffx.157395.1.S1_s_at	CK102655	hypothetical protein	-	2e-12	At5g13860	ELC-Like (ELCH-like)	O.I.	H.G.	S.X.	Please selecteFP Browser (expression)
0.55	82.2	0.96	PtpAffx.221137.1.S1_at	pmrna37769	hypothetical protein	-	6e-109	At1g47550	unknown protein	O.I.	H.G.	S.X.	Please selecteFP Browser (expression)
0.30	52.0	0.96	PtpAffx.100628.1.S1_s_at	CF232037	hypothetical protein	-	2e+0	At2g38350	unknown protein	O.I.	H.G.	S.X.	Please selecteFP Browser (expression)
0.25	43.6	0.96	PtpAffx.10658.1.S1_at	DN500790	-	-	6e-4	At1g07705	transcription regulator	O.I.	H.G.	S.X.	Please selecteFP Browser (expression)
0.18	30.8	0.96	PtpAffx.126112.1.S1_s_at	BP923608	hypothetical protein	-	3e-109	At5g11490	adaptin family protein	O.I.	H.G.	S.X.	Please selecteFP Browser (expression)
0.15	25.3	0.96	PtpAffx.144041.1.S1_s_at	CX175818	hypothetical protein	-	9e-14	At3g26370	unknown protein	O.I.	H.G.	S.X.	Please selecteFP Browser (expression)
0.13	21.6	0.96	Ptp.7424.1.S1_at	BU861469	hypothetical protein	-	7e-52	At1g12840	DET3 (DE-ETIOLATED 3)	O.I.	H.G.	S.X.	Please selecteFP Browser (expression)

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
3.0	92.9	GSM328560	Populus x canescens root control_rep_11	GSE13109	Effect of hypoxia on gene expression in Grey poplar
3.0	92.9	GSM327358	Populus balsamifera_20071015_Seedling_continuous_light_6d_2	GSE13990	Populus balsamifera developmental tissue series
2.6	91.3	GSM327281	Populus balsamifera_20071015_Seedling_continuous_light_6d_1	GSE13990	Populus balsamifera developmental tissue series
2.3	89.8	GSM328561	Populus x canescens root control_rep_12	GSE13109	Effect of hypoxia on gene expression in Grey poplar
2.3	89.8	GSM334225	Populus balsamifera_1006_mature_leaf_midday_2	GSE13990	Populus balsamifera developmental tissue series
2.2	89.3	GSM328285	Populus x canescens root control_rep_04	GSE13109	Effect of hypoxia on gene expression in Grey poplar
2.1	88.6	GSM328564	Populus x canescens root hypoxia_rep_06	GSE13109	Effect of hypoxia on gene expression in Grey poplar
2.0	88.0	GSM327403	Populus balsamifera_20071015_Etiolated_seedling_6d_3	GSE13990	Populus balsamifera developmental tissue series
2.0	88.0	GSM327359	Populus balsamifera_20071015_Seedling_continuous_light_6d_3	GSE13990	Populus balsamifera developmental tissue series
1.9	87.2	GSM328557	Populus x canescens root control_rep_08	GSE13109	Effect of hypoxia on gene expression in Grey poplar

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Hordeum_vulgare

Oryza_sativa

Triticum_aestivum

Vitis_vinifera

Zea_mays

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