Co-expression analysis

Gene ID PtpAffx.151850.1.A1_at
Gene name cytochrome P450
Homology with ArabidopsisSimilar to At5g67310: CYP81G1 (HF=4e-3)
Module size 6 genes
NF 0.70
%ile 96.2

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.9199.20.96PtpAffx.151850.1.A1_atBP933761cytochrome P450-4e-3At5g67310CYP81G1O.I.H.G.S.X.
0.7393.60.97PtpAffx.224424.1.S1_s_atpmrna42934hypothetical protein-1e-3At3g17410serine/threonine protein kinase, putativeO.I.H.G.S.X.
0.6791.10.97PtpAffx.218528.1.S1_atpmrna34182cytochrome P450-3e+0At5g12450-O.I.H.G.S.X.
0.6791.10.97PtpAffx.139165.1.S1_atBP922839cytochrome P450 /// cytochrome P450-1e+0At3g52710unknown proteinO.I.H.G.S.X.
0.5078.60.96PtpAffx.153434.2.A1_atCK094158hypothetical protein-3e+0At5g52975unknown proteinO.I.H.G.S.X.
0.3661.60.97PtpAffx.38964.1.S1_atDN490095--2e-15At3g28580AAA-type ATPase family proteinO.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
4.596.1GSM327409Populus balsamifera_1006_root_midday_3GSE13990Populus balsamifera developmental tissue seriesLink to GEO
3.894.9GSM327412Populus balsamifera_1006_differentiating_xylem_midday_2GSE13990Populus balsamifera developmental tissue seriesLink to GEO
3.694.5GSM327407Populus balsamifera_1006_root_midday_1GSE13990Populus balsamifera developmental tissue seriesLink to GEO
3.694.5GSM136938Poplar contacted with P. aeruginosa PAO1 in 1 x hrp + 0.25 % sucroseGSE5887Pseudomonas aeruginosa PAO1 virulent genes in the poplar rhizosphereLink to GEO
3.293.5GSM372095Clone3200_LPI5_N-_4w_rep1GSE14893Comparative transcriptomics analysis of Populus leaves under nitrogen limitation: clone 3200Link to GEO
3.193.2GSM327661Populus balsamifera_Male_Catkin_midday_3GSE13990Populus balsamifera developmental tissue seriesLink to GEO
2.791.8GSM327413Populus balsamifera_1006_differentiating_xylem_midday_3GSE13990Populus balsamifera developmental tissue seriesLink to GEO
2.791.8GSM327408Populus balsamifera_1006_root_midday_2GSE13990Populus balsamifera developmental tissue seriesLink to GEO
2.389.8GSM362886Clone1979_LPI2_N-_4w_rep2GSE14515Comparative transcriptomics analysis of Populus leaves under nitrogen limitation: clone 1979Link to GEO
1.987.2GSM244434Mlp infected tissue, biological rep2GSE9673Comparative transcriptomic reveals signatures specific to various interactions with Melampsora rust fungiLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Triticum_aestivum
Vitis_vinifera
Zea_mays



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